Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0510 ATGGAGTTTCTTGCTGCAATGGGAGCTGGAATTGTGGGAAAACTTGGGGAGATGTTAGTATATCCAATCACAATGCAATTCAAAAATCTAATTCAGTATGAAAAAAATATGGAGAACATGAAGAATGAACTTAAAAACTTGGAAGACAGAAAACTTGCAATTGAAGGAATGGTGGATGCAGATAGAAGGAATGGTCATCACATTGCACCTAATGTGGAACACTGGCTTTACAAGGTGGACAATATCATTATTGAAAATAGAATACAATTGGGAGATTACAATGATGAAGAAGTGAATAAGAACAAGAAGTGTCTTTCTGGGTTGTATCCGAATTCGGTGTTTCGTCGTTGTTCAATGAGCAAGAGAGCTAGAAAAAGGACACAAGATCTTGTTTCCTTGAAGGAAGAGAAACTTGAGATCATATCCTACCCTGCACCTCCACCGAAACTTGGATCCACCTTCACAGAAGGAGCTTATAAGAGATTTGTCTCTAGGGAATCAATTTTAAGAGAGATCATAGAGAAATTGAAGGATGATGAGTTCCAAAGGATAAGCATTTGTGGGATGGGGGGTGTGGGGAAAACCACATTGGTGAAAGAACTGATAAAAGTTATAGAAGTAGATAAGGTGTTTGATGATATTTCCATGGCTATAGTGACCCAAGTTCCAGATTATAGGAAGATTCAAGGTCAAATTGGTGATACACTAGGCTTGAAATTTGATAAGGAGACTGTTCAAGGAAGGGCATGTCAACTACTTGAGAGGCTTAAGAAGATCAATAAGGTTTTAATAGTACTAGATGATGTCTGGACAGAGCTCGATTTCGAGGCGATCGGTCTTCCTTCGAATGACAAGCTTCACAAAGGCTGTAAAATTTTATTCACTTCAAGAAATGAGGATGTGTGCCATAAGATGAGGAGTCAAAGTAACTTCAACATCCCTATTTTGTCTAAAGAAGAAGCATGGGATCTCTTCAAGGATACTATAGGAGGTAATTTTGTCGACAAACCCGATATCCATCACATAGCAGAAGAAATTGCAGATGAATGCAAAGGTTTACCAATTGCAATTGTCACAATAGGAAAAGCACTAGGAAATAAGGAGAAGCATGCATGGGAGAATGCACTTGAGCAACTAAGAAATTCTTCAATAATTACTTCCTTCTCAGAGATGCAAGAATATTGTTCTGTATATTCATGTATTGAACTAAGTTATAACTTTCTAAGCAATGAAGAAGCTAAATCACTTCTTTTGCTTTGTTGCTTATTTCCAGAAGACTTTGACATTCCTATTGAAGTTCTACTCAGACATGGGGTGGGATTAGGTTTGTTTAAAGGCTTAGGTGCTTTGTCTAAAGTGAGGAATAGAGTGCATACcttggtggatggtttgaagaaAGGTTTCTTGTTGTTGGATAGCAATGAGGAAGAGTGTGTGAAAATGCATGACGTGGTTCGTGATACTGTCATAACAATCGCGTCGAAAACAGAACTGGGATTTGTAGTGAAATGTGATGTTGGGCAAGAATTGTCAAGAGAGAACACATGGCATCATGTCAATGCAATGTCACTTATGTTTGATGAGATTAAGGTTGATTCTAGGAGATTGCAAtgtccaaaccttaaactcttaCAAGTTGCTTCAAAGAAAAGGCAAGAAGCAATTTCAGAAAATCTCTTCCATAACATGAGCAAGCTCATGGTTCTAGGCCTAAGATATTTGTGCATTCCATCAATGTCTTCTTCTTTCCGGACACTCGAAAACCTTCGTGCCTTACGATTAGAAGATTGTCAAGTTGAAGACGTATCGATAATCGGTAAGGAGCTAAGGAATGTAGAAATCCTAAGCTTTGCTCGCTCAAACATCAAAGTATTGCCAATAGAGATTGGGAAACTAATCTTTTTAAGATTATTGGATTTGACAGAATGCAACCATCTTGTTCAAATATCTTCAGGAGTCCTGCCTAGTTTATCCCAATTGGAAGAACTATATTTCAGAGTCAAGAATTTCCCTTGGGAGGAAAAAAGTTCCATTGTTGCAGAACTCAAATCATTGTCTCATCAACTAAAAGTTTTTGAGATTGCAATAATGGGAATTGAAGTTTTCCCAAAAGATTTGGCCCTAAAAAACTTGGTTAAGTTTTGGGTCTATGTGGGAGATTCATCTACTCTTTCTCATGGTCTTGTACGTGGGGGTTATCTGCACCCAAACATCCTAAAACTAAACAATTTGTATTCCAAATACATCAAAGAGAATGTGTCAATTCTACATTTACTTAGAAAATCTGAAATTCTCAACCTAGTTGATGTGAAGCAGTTAGAAAATGTGGCCTATGAATTGGACAAAGAGGGTCTTCCACACTTGAGAAGTTTGAGTATTGAGTTTTGCAACAATTTGAAGTATATTGCAGATACAAGTGATTGCAATTCAAGCTGTGCCTTCCCTATGGTTCAATCATTGTCTCTACACAGTTTGGATAGTttgaaaaagatatttcatGGAACCAATCATGCAAGTCACAGGGGTCACCATTTTAAGAGCTttacttcatcatcatcatcatcatcatcatcatgccAATGCTTTGGTAGCCTAAGAGATCTGAAAGTAGAATTTTGCAACAAGTTGAAGTGTGTCTTCTCAGAATTTCCAGGGTCAAGCTTTGCCATGCTCCAACACTTGCATGTGACTGAATGTTATGGGATTGAATGTGTTGTCTCCCATGAAACAGATGATGAGAATTCAATTTTCAAGTTCTCAAATTTAGTGGAACTGAAGCTACAAGAACTCCCTAGCCTTGTTGGGTTTATTGTACCTGATGGGAGGAATGAACTTCACCAATTAAAATCTCAGGTGGATGAAGAATTGAAGTTTGATGATGACCAACATCAACTATGGTCCAACTCAAATTTGGGAGCTGAGGAATCTGTTTCCATTGGTGGTACACTAATTGAATCTAAGTGGATCCATCACTTCccaaaattagagaaaatttCCTTACTTGAATGCCCTTTGTTAGAGATGGTGTTTGACTTGCAAGAAGTACATAATGATGGGCATCCAATTGATATGTTATTTTCTCAACTCAGAGAAATAGAGATATCTTGGCTTAGTAAGCTAAGACATATTTGGGGAAATGTTCCAAGTTATATTCAAGGCTTTCAGAATTTGAGATCACTCAAAGTTAAAAAATGTGATGCTTTAAGATATGTATTCACTCCCACCATTGCCAGATTACTCACACAGCTTCAAAAATTGGTGATACACAGTTGCCAGTTGATGGAGAAAGTtgttgaagatgatgaaggagaaaaagagaaagtggAAACCTTTGTGTTTGATAAGTTAGATTCTTTGACACTTAGGGACCTCCCAAGCCTTGTAAGCATTTGTCCAGATTCTTGTGAGCTAATTTGGCCAAAACTGAGATACTTATGCATTGATGGATGTCCCAAACTGAAAACATGTAGGCCAATTCAAACCCTTGCAAAGCAAGAGAATCACAACCACTCCTTATCAAATTCAAGCTTCCATGATATTGGTTTCAGCACTTCAAGGTTTCTTCAGAGTTGCTTTGTTTGCACTACACCAAACAATGAGATGTCCAACACAATGGGGAAATCAAATTTCCAAAGATCAAGAAAGATGAGAAACAaggttagtttgataaaagaCCAGGTCTCTTCTGACGATGAAACGAAGACCCGAGAAGAAACGCGATCGTGCATGCCAAATTTGGAACAACTTCAAGTAAAAGGATGGGAATCACTAGATGCAGTGTTCCAGCTTGAACAAAACCAGCACAATTGTATAGTAAAGATGATGCCTATGTCAACAAGTCCAACATCAATTATTAGTGGCTTCAACAACCTCACATTGTTGAGTTTAGATGCTTGTCACAAGTTGAAATATCTATTCCCACATTCCATTGCAAGGCTTCTTGTGAGATTGCAAGAAGTGAAAGTATCAAACTGTAAAATGGTGGAGCAACTAgtcaaaagagaagaaaatagcTCAATTACATCTCCCAAAGAATCATGTGTCTTAGAATTCCCTTCCCTGAAGAGAATTAGCATCATTAGCTGCAGCATGCTAGAAGTTTTCATTGAGGATGGAGAGTGGAGAAAAGATATGACTACATTTCATCAAGTACAGTCTCTTACATTAAGCCATCTACCAAATCTTGTGAGCTTCTGCCATCAACCTTGTATCCTGGCACAACCATCTTCGGAGAAATATGAAGCCAACAACCATCACAAACAAGTTAAGGTTGCAGATGAAGCATGGAGAATTCAAAGGGATGATCCAACCATAGATGACTTCTTGTTTTCAAATCTAACATACTTAGGGATAAAGCAATGCAGAAAAATTAGCTGGTTGTTCTCTCCTTCATCCTCAGCCAGCCTTGTGAGTCTACAAGAGCTAGAGATATGTGATTGTGAGAACATAAAGGCAATAGTATCATCAAGAGAAGAAATTCAAGCAAGTATAATAAAGATTGTGTTCCCTAAATTACAAAGGCTGAAACTTGAACGGCTCTCCAACCTCAGTGCCTTTTGTCAAGGCTTCTATGGCTTGGATTTCCCATCACTTGAAGAAGTATTCTTTGGAGATTGCCATAGCATGGAGGTATTCTCACATGGACCTCCAGACACTCCAAAGCTAAGGAGTATAACCATGAAGGTTGGAAACCTTACCAGAAATATATGGATGGGAGATTTGAATGCCACTGCACAATTATCCAAAGGAATTATAAAGGGCTATAGGCAACTACAAGGGAACTATTCTTGTGTCATTATGGCTATCCTAGAGTTGGCATTCCAAACATCAGAGTCACTTGGATGGATCAAGCAAGATCAAACCTTACACAGCTACTTCATGGAAGAAACAGAGATGACAGTCTCAGGCTTCCAAAGTCTATTGACTCTAGTACCATCCAACGTGATACACATATTTCAAAACCTCAAGAATCTCACAGTAAGAGATTGCCCCTCACTCATTCAAGTGTTTGAATCAGAAGGAGTACTGAATGTAAAGACAGGGCAAGGCATGACATGTTATGAGCTAGAAGCCATGAATTTGCATTCTCTACCAAAACTGATTCACATATGGAAGAATCTTGACCAAGTTTTAGACTTTGGGAAGCTGAAAGTATTAAAAGTGGAATACTGTGGCAATTTGAGCACTATGATGTCACCTTCAATGGCCAGGAATCTTGTCCAACTTAGGCATCTTCGTGTACAAGGTTGTCAAATGATGGAGGAGATAGTGAGGAAGGAAGCTGAAGGAGAAAATAAAGCTGAGATAGTGTTTCCATTGTTGAACAAGTTGGAGCTTCGTCACTTGCCCTCCCTCAAATGGTTTTGTTCAGCAAGTTTAGACCTTGAGCTTCCATTCTGTGAAGAAATGGTAATTGAAAAATGCCCAAAGATGACGACTTTTTCTTTTGGGGATGTAAGCACACCAAAGCTTCCTAATATATACAAAGGATCCTATGAGTATGTAGATGTTGTGGGAGACCTTAATATGACCATATATCATGCTCATTCAGAGGATTTAAAGGTGGCATTCCAAAGATCTGACACAATCAATTGGATTGAGAATGATGAAACCCTACTTGCCTACTTAACAAGAGTCACAGAACTGGTTGTTGAAGGTTGTGAGAAGTTGTTAAACTGTGTTCCATCCAATATGCTACACACATTGCAACATCTAAAGCAACTCAAGGAGGAGGTAGGGAAGCTGATGGATCAGGCAACAAATGCAAATGCTGCTCAATCTGCCAAAGAATCCTGCGAAGAGgGTGGTCAGCAAATAAAGGCAAAGGCACAAGATGCTGCTGATGCTGTCAAGAGCACAGTTGGAGcctacaaataa 5877 0.375 MEFLAAMGAGIVGKLGEMLVYPITMQFKNLIQYEKNMENMKNELKNLEDRKLAIEGMVDADRRNGHHIAPNVEHWLYKVDNIIIENRIQLGDYNDEEVNKNKKCLSGLYPNSVFRRCSMSKRARKRTQDLVSLKEEKLEIISYPAPPPKLGSTFTEGAYKRFVSRESILREIIEKLKDDEFQRISICGMGGVGKTTLVKELIKVIEVDKVFDDISMAIVTQVPDYRKIQGQIGDTLGLKFDKETVQGRACQLLERLKKINKVLIVLDDVWTELDFEAIGLPSNDKLHKGCKILFTSRNEDVCHKMRSQSNFNIPILSKEEAWDLFKDTIGGNFVDKPDIHHIAEEIADECKGLPIAIVTIGKALGNKEKHAWENALEQLRNSSIITSFSEMQEYCSVYSCIELSYNFLSNEEAKSLLLLCCLFPEDFDIPIEVLLRHGVGLGLFKGLGALSKVRNRVHTLVDGLKKGFLLLDSNEEECVKMHDVVRDTVITIASKTELGFVVKCDVGQELSRENTWHHVNAMSLMFDEIKVDSRRLQCPNLKLLQVASKKRQEAISENLFHNMSKLMVLGLRYLCIPSMSSSFRTLENLRALRLEDCQVEDVSIIGKELRNVEILSFARSNIKVLPIEIGKLIFLRLLDLTECNHLVQISSGVLPSLSQLEELYFRVKNFPWEEKSSIVAELKSLSHQLKVFEIAIMGIEVFPKDLALKNLVKFWVYVGDSSTLSHGLVRGGYLHPNILKLNNLYSKYIKENVSILHLLRKSEILNLVDVKQLENVAYELDKEGLPHLRSLSIEFCNNLKYIADTSDCNSSCAFPMVQSLSLHSLDSLKKIFHGTNHASHRGHHFKSFTSSSSSSSSSCQCFGSLRDLKVEFCNKLKCVFSEFPGSSFAMLQHLHVTECYGIECVVSHETDDENSIFKFSNLVELKLQELPSLVGFIVPDGRNELHQLKSQVDEELKFDDDQHQLWSNSNLGAEESVSIGGTLIESKWIHHFPKLEKISLLECPLLEMVFDLQEVHNDGHPIDMLFSQLREIEISWLSKLRHIWGNVPSYIQGFQNLRSLKVKKCDALRYVFTPTIARLLTQLQKLVIHSCQLMEKVVEDDEGEKEKVETFVFDKLDSLTLRDLPSLVSICPDSCELIWPKLRYLCIDGCPKLKTCRPIQTLAKQENHNHSLSNSSFHDIGFSTSRFLQSCFVCTTPNNEMSNTMGKSNFQRSRKMRNKVSLIKDQVSSDDETKTREETRSCMPNLEQLQVKGWESLDAVFQLEQNQHNCIVKMMPMSTSPTSIISGFNNLTLLSLDACHKLKYLFPHSIARLLVRLQEVKVSNCKMVEQLVKREENSSITSPKESCVLEFPSLKRISIISCSMLEVFIEDGEWRKDMTTFHQVQSLTLSHLPNLVSFCHQPCILAQPSSEKYEANNHHKQVKVADEAWRIQRDDPTIDDFLFSNLTYLGIKQCRKISWLFSPSSSASLVSLQELEICDCENIKAIVSSREEIQASIIKIVFPKLQRLKLERLSNLSAFCQGFYGLDFPSLEEVFFGDCHSMEVFSHGPPDTPKLRSITMKVGNLTRNIWMGDLNATAQLSKGIIKGYRQLQGNYSCVIMAILELAFQTSESLGWIKQDQTLHSYFMEETEMTVSGFQSLLTLVPSNVIHIFQNLKNLTVRDCPSLIQVFESEGVLNVKTGQGMTCYELEAMNLHSLPKLIHIWKNLDQVLDFGKLKVLKVEYCGNLSTMMSPSMARNLVQLRHLRVQGCQMMEEIVRKEAEGENKAEIVFPLLNKLELRHLPSLKWFCSASLDLELPFCEEMVIEKCPKMTTFSFGDVSTPKLPNIYKGSYEYVDVVGDLNMTIYHAHSEDLKVAFQRSDTINWIENDETLLAYLTRVTELVVEGCEKLLNCVPSNMLHTLQHLKQLKEEVGKLMDQATNANAAQSAKESCEEGGQQIKAKAQDAADAVKSTVGAYK 1958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0510 1958 PANTHER RPP4C3 29 814 - -
Sto10g0510 1958 PANTHER RPP4C3 1443 1577 - -
Sto10g0510 1958 PANTHER RPP4C3 1279 1409 - -
Sto10g0510 1958 PANTHER RPP4C3 1039 1155 - -
Sto10g0510 1958 PANTHER RPP4C3 1713 1836 - -
Sto10g0510 1958 PANTHER RPP4C3 853 937 - -
Sto10g0510 1958 PANTHER - 853 937 - -
Sto10g0510 1958 PANTHER - 1443 1577 - -
Sto10g0510 1958 PANTHER - 1279 1409 - -
Sto10g0510 1958 PANTHER - 29 814 - -
Sto10g0510 1958 PANTHER - 1039 1155 - -
Sto10g0510 1958 PANTHER - 1713 1836 - -
Sto10g0510 1958 Coils Coil 23 57 - -
Sto10g0510 1958 PRINTS Disease resistance protein signature 183 198 - -
Sto10g0510 1958 PRINTS Disease resistance protein signature 256 270 - -
Sto10g0510 1958 PRINTS Disease resistance protein signature 350 364 - -
Sto10g0510 1958 PRINTS Disease resistance protein signature 630 646 - -
Sto10g0510 1958 Gene3D Ribonuclease Inhibitor 1218 1427 IPR032675 -
Sto10g0510 1958 Gene3D Ribonuclease Inhibitor 1630 1826 IPR032675 -
Sto10g0510 1958 Gene3D Ribonuclease Inhibitor 986 1176 IPR032675 -
Sto10g0510 1958 Gene3D Ribonuclease Inhibitor 1433 1567 IPR032675 -
Sto10g0510 1958 SUPERFAMILY L domain-like 818 1157 - -
Sto10g0510 1958 Gene3D - 404 491 IPR036388 -
Sto10g0510 1958 SUPERFAMILY L domain-like 479 831 - -
Sto10g0510 1958 Gene3D Ribonuclease Inhibitor 527 950 IPR032675 -
Sto10g0510 1958 Coils Coil 1902 1925 - -
Sto10g0510 1958 CDD Ras_like_GTPase 186 267 - -
Sto10g0510 1958 Pfam NB-ARC domain 166 406 IPR002182 GO:0043531
Sto10g0510 1958 SUPERFAMILY RNI-like 1283 1760 - -
Sto10g0510 1958 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 420 IPR027417 -
Sto10g0510 1958 Gene3D - 316 403 IPR042197 -
Sto10g0510 1958 Gene3D - 154 313 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0510 Sto-Chr10 4153494 4166554 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0510 184 466 WRKY Transcription Factor Family AT5G45050 26.087 2.64e-09 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0510 - - vra:106757704 1886.31