Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0501 ATGAAACCATCAAGGCAACAAAGAGTGTGCAAGGCCTTGTGTTGCAGCTGCAATTGCAGGCTTAGTGTTTCTTCCTCCTCAGAGGAAGTAGAGAGTTCCATATCAGATAGATTCCCATCGGTTTCGAGCCTGGCTCATGCCATGGTGCAAGAACGGCTCGATCAGATGATCAGAGAAAGAcatcatcataatcatcatcatcatcatgttGGGAGAAGAGATAATGAAGAAGGAACCAAGTTTGTTGTGATGGTGGCTATGGAGAAGTGTTCTTATGATCCAAGAGAGGATTTTAGGGAGTCAATGGTGGAGATGATCATGGCAAATCGCCTTCAAGAACCAAAAGATCTTAGGAGTTTATTGAATTACTATGTCTCAATGAATTCACAAGAGTACCATAGTCTTATACTTGAGGTGTTTCATGAGGTTTGtgcaaatttgtttttaaaatcttGTAAATGCCATTggtga 471 0.3737 MKPSRQQRVCKALCCSCNCRLSVSSSSEEVESSISDRFPSVSSLAHAMVQERLDQMIRERHHHNHHHHHVGRRDNEEGTKFVVMVAMEKCSYDPREDFRESMVEMIMANRLQEPKDLRSLLNYYVSMNSQEYHSLILEVFHEVCANLFLKSCKCHW 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0501 156 PANTHER TRANSCRIPTION REPRESSOR-RELATED 7 150 - -
Sto10g0501 156 Pfam Transcriptional repressor, ovate 91 148 IPR006458 -
Sto10g0501 156 ProSiteProfiles OVATE domain profile. 87 146 IPR006458 -
Sto10g0501 156 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 85 148 IPR006458 -
Sto10g0501 156 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 7 150 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0501 Sto-Chr10 4112374 4112880 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Sto10g0501 Ovate 4.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0501 - - tcc:18597232 204.527