Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0498 ATGCATGATGTGGATGTGGGGCTGATTACGTGTTCAGCAAGTAGCATGCAGTCCCACGCTCCCACCGACTCGGAGTGTCGTTCACGCGCTGCCATATTGCCTAAGAACTTCTCACTCATTCCCGATTTCCCGCTCCTTCGATCTTGTCCATCTTACAATGGCGATTCTGGAGCGGTTAGTACGGTCATTTCGGGCATGGCGTTCAATTTCCTCTTCCAAAACCCTAACTTCTTCACCCGCTTGTTCGCGTATTCCCCGCCCTTTCCTCTACATTCAAGAGCTCTACCTGATGCTGCGGGGCCTTGTTCGTCGTTTCCAGCTGTTTTAGTTGGTATTTTTGGGGCTGGAGTTCTAAATTCAGCATACGCGGACGCTAATGAGTCTGCATCTGAACCTTCCTACCCATCAACATCTCCCTCAAGTTCTGAGGGTGTGGAAGGGACTGTGAAGACTGGACCTCTCTCACCTCCTGAGGGCCTGGATGAAACTGCCAAAAAAGAACGTGAGAGAATTCTACATTTGCTTAGAAGTAGAGGAATTCCATATGGTTCTTATCCTAACTTCAATGTCGCTGTTAAAGGCCAAAAGGTCAGCATCAAGTTCCAAATTCCTCCTACATGTGAAGTTACTCAACTTCTTACAAATCTTGTTTCACAACTTGGAGTGAAGGTTGAAGAGAATGGTGGTGGTTCAGATATGATATTGCGCGCTTGGGACAGCACAGTTGCTTGGCAACTTATCCTTAGTCCACCAAAGCAAAAGGATGTTCAAGGGAAAGTTCAGTCTTCAATTCATGTGAATCCAAGTGATGAAGATCTATGCGTACTcatatattatcccatcatcAGCTCCGACAAAGCTGAAATTGAATTCATTAAGAAAGGGAGCTTGAGTCTTAAAGAGCTTGATGCCTTTGTCTCTGTTTTACAATTAGCTGGCACCAAGTTGGGACAAAGAAGAACCCCAGTAAGGAGACCAAGGGAAGAGGCAGAAAAGGCGCCATCTGTTGAGAAATCTATTGCTAGTCTTGAATCAATGGGAGTGAGAGTTTATGGACTCAATGAACCCCACTCAAGTATCTTAAGTGGCGAGATATCATGGGACAACATTGCTGGATATGAAAACCAAAAACGagaaatagaaaatacGATACTGTTAGCTTTACAAAGTCCTGAAGTATATGATGATATTGCTCGTGGGACTCGTCATAAGTATGAGACAAACAGGCCTCGAGCTGTGCTCTTCGAAGGTCCACCAGGTACAGGGAAAACTTCTTGTGCTCGTGTTATTGCTAATCAAGCGGGTGTCCCTTTGCTGTATGTGCCACTAGAGGTTGTCATGTCTAAATACTACGGTGAAAGTGAAAACCTGCTAGGGAAAGTGTTTTCTCTTGCCAATGAACTTCCAAAGGGTGCTCTTATATTTCTCGATGAAGTTGATTCTTTTGCTGCTGCTCGTGATAATGAAATGCATGAAGCTACACGCAGAATATTGTCAGTGTTATTGCGACAgATTGATGGATTTGAGCAAGATAAGAGAGTGATTGTCGTTGCTGCTACAAACAGAAAGCAAGACCTTGATCCAGCGTTAATCAGTCGGTTTGATACTATGATCACTTTTGGCTTACCTGATCATCATAACCGAAAGGAAATAGCAGCCAAATATGCCAAGCACCTTAAAGATTCAGAATTGGATCAAATTGCAAGAGTTACGGAAGGTATGTCTGGAAGGGACATAAGAGATGTTTGTCTGCAAGCTGAAAGGTCCTGGGCATCAAAGATTATTCGAGGACAAGTATctaaagaaggagaagaagcttgTCTTCCACCACTGCAAGAATATGTAGATAGTGGGTCGAATAGGCAAAAAGCCTTACTGAGTATTGCAGAAAATCGGACATTGCGAAGACCGACCACTGGGAATGGAAGAAGCCTAGCCTAG 1941 0.4312 MHDVDVGLITCSASSMQSHAPTDSECRSRAAILPKNFSLIPDFPLLRSCPSYNGDSGAVSTVISGMAFNFLFQNPNFFTRLFAYSPPFPLHSRALPDAAGPCSSFPAVLVGIFGAGVLNSAYADANESASEPSYPSTSPSSSEGVEGTVKTGPLSPPEGLDETAKKERERILHLLRSRGIPYGSYPNFNVAVKGQKVSIKFQIPPTCEVTQLLTNLVSQLGVKVEENGGGSDMILRAWDSTVAWQLILSPPKQKDVQGKVQSSIHVNPSDEDLCVLIYYPIISSDKAEIEFIKKGSLSLKELDAFVSVLQLAGTKLGQRRTPVRRPREEAEKAPSVEKSIASLESMGVRVYGLNEPHSSILSGEISWDNIAGYENQKREIENTILLALQSPEVYDDIARGTRHKYETNRPRAVLFEGPPGTGKTSCARVIANQAGVPLLYVPLEVVMSKYYGESENLLGKVFSLANELPKGALIFLDEVDSFAAARDNEMHEATRRILSVLLRQIDGFEQDKRVIVVAATNRKQDLDPALISRFDTMITFGLPDHHNRKEIAAKYAKHLKDSELDQIARVTEGMSGRDIRDVCLQAERSWASKIIRGQVSKEGEEACLPPLQEYVDSGSNRQKALLSIAENRTLRRPTTGNGRSLA 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0498 646 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 139 629 - -
Sto10g0498 646 Pfam ATPase family associated with various cellular activities (AAA) 413 541 IPR003959 GO:0005524|GO:0016887
Sto10g0498 646 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 365 587 IPR027417 -
Sto10g0498 646 MobiDBLite consensus disorder prediction 128 165 - -
Sto10g0498 646 CDD AAA 406 542 - -
Sto10g0498 646 Gene3D - 361 542 IPR027417 -
Sto10g0498 646 MobiDBLite consensus disorder prediction 128 148 - -
Sto10g0498 646 SMART AAA_5 409 544 IPR003593 -
Sto10g0498 646 ProSitePatterns AAA-protein family signature. 514 533 IPR003960 GO:0005524|GO:0016887
Sto10g0498 646 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 139 629 - -
Sto10g0498 646 Gene3D - 543 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0498 Sto-Chr10 4071219 4078141 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0498 364 586 Calmodulin-binding Proteins AT3G56690 31.739 2.47e-28 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0498 - - gmx:100803362 728.398