Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0481 ATGGACTGGACTAGGGGCCCCACCATCGGCCGGGGTTCCACCGCCACGGTCTCCCTCGCCTCGTCTCCCCGGTCCGGCCATGTGTTCGCCGTCAAGTCCGCCGAGCTCCACCGATCGGAATTCCTCAAAAGGGAACAAGGAATTCTCTCAAAATTAATGTGTCCTCAAATTGTAGCATACAAAGGTTGTGACATTACCTTAGAGAATGATGTACTAATGTACAATTTGTTCATGGAGTATGCACCTTACGGCACACTCTCCGACACGGTGGCTCGCCGGGGAAGCGGGCTAGACGAGGTCACGGTTCGAACCTACGCACACCAAATCCTGCTTGGGCTCAACCACCTTCACTCCAATGGCATTGTGCATTGTGACATCAAGGGAAAAAATGTCTTGGTCACGGACCATGGGGCCAAAATTGCCGACTTGGGTTGTGCTCGGATGGTGGCGGATTGCGGCGGAGCAATTGCCGGCACGCCGGTGTTCATGGCGCCGGAGGTGGCGCGTGGGGAGCAACAGGGCTTCCCCGCCGACGTATGGGCTCTCGGGTGCACCGTGTTGGAGATGATCACGGGCTGTGCCCCGTGGCCCGACGTGTCCGACCCGGTAAGCGCGATGTACCGGATCGGATTCTCCGGCGAACTGCCGGAGATTCCGGGATTCGTGTCGGATCAAGGGAGGGACTTTGTGAGCAAGTGCTTGAAGAGAGACCCGAATGAGAGGTGGACGGTGGGTGAGCTTCTCCGACATGGGTTCGTTGAGGAATTAGGTTCGATCTCAAAAGTGAAGGAAATTGAATTCTCTAATTCGGATAGTCCGACTAGTGTGATGGATCGGAGCATTTGGGAATCAACTAAGGATTCGACCCGAGTTATTTCCTCGGATTCTGCCAGAGACAGGATTCGTAGGTTATGTGGAGATGATACGACGTCGTTTGATGATGCTAATATGCCCAATTGGGAATGGGAGGAAGAGTGGATTTCAGTAAGAAGCAATGGTGTCGAAGAGTGTAATGGAAAAACAGAGAGTGATTATGTTAGAAAGAAGGAAATGACCATAGTAGCAGCATTCACCATACTATGA 1083 0.53 MDWTRGPTIGRGSTATVSLASSPRSGHVFAVKSAELHRSEFLKREQGILSKLMCPQIVAYKGCDITLENDVLMYNLFMEYAPYGTLSDTVARRGSGLDEVTVRTYAHQILLGLNHLHSNGIVHCDIKGKNVLVTDHGAKIADLGCARMVADCGGAIAGTPVFMAPEVARGEQQGFPADVWALGCTVLEMITGCAPWPDVSDPVSAMYRIGFSGELPEIPGFVSDQGRDFVSKCLKRDPNERWTVGELLRHGFVEELGSISKVKEIEFSNSDSPTSVMDRSIWESTKDSTRVISSDSARDRIRRLCGDDTTSFDDANMPNWEWEEEWISVRSNGVEECNGKTESDYVRKKEMTIVAAFTIL 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0481 360 CDD STKc_MAPKKK 2 253 - -
Sto10g0481 360 ProSiteProfiles Protein kinase domain profile. 3 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g0481 360 PANTHER MAP KINASE KINASE KINASE 1 340 - -
Sto10g0481 360 SUPERFAMILY Protein kinase-like (PK-like) 3 276 IPR011009 -
Sto10g0481 360 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Sto10g0481 360 Gene3D Transferase(Phosphotransferase) domain 1 2 310 - -
Sto10g0481 360 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 340 - -
Sto10g0481 360 SMART serkin_6 3 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g0481 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Sto10g0481 360 Pfam Protein kinase domain 5 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0481 Sto-Chr10 3905384 3906545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0481 2 330 MAP Kinase Kinase Kinase AT5G55090 49.713 3.77e-110 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Sto10g0481 Pkinase 1.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0481 K20716 - qsu:112036531 407.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0694 7 5085716 5090893 Sto10g0481 10 3905384 3906545 ECH
Sto12g0493 12 3230848 3234663 Sto10g0481 10 3905384 3906545 ECH
Sto10g0481 10 3905384 3906545 Sto10g0481 10 3905384 3906545 ECH