Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0471 ATGAGAGTTTGTAGCCGGCCTTTCGGGACTCCGCCGCCGGAAATAAGCTTGAAATCGCCGGTGGTTCGACCTTATGTTCGGTCCAAAATGCCCCGGCTTCGCTGGACACCTGATCTCAACCATTGTTTTATGCTTGCGGTTCAAAGGCTTGGTGGAGAGGATAGGGCAACTCCTAAGTTGGTTTTGCAGCTCATGAATGTGAAAGGGCTTACTATATCTCATATTAAAAGCCACCTTCAGATGTACAGGAGCAAGAAGCATGAGCAGATGATTCGAGCAGCAAAGAAGAATATTGGATTATTACATTCCTCAATCATCAACTCAAGCTATGGGCAACAGAAACAGAATGTTGATGAAGAGAGCTGTGGAAGTCATTATATGCCACACAACAATACTGCTGCCATTATTCAACACCAATATTATAGAAAACGAGATAAGCGAGTGGATATCGCATCACTTCTATCTCTTTGA 471 0.4395 MRVCSRPFGTPPPEISLKSPVVRPYVRSKMPRLRWTPDLNHCFMLAVQRLGGEDRATPKLVLQLMNVKGLTISHIKSHLQMYRSKKHEQMIRAAKKNIGLLHSSIINSSYGQQKQNVDEESCGSHYMPHNNTAAIIQHQYYRKRDKRVDIASLLSL 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0471 156 Gene3D - 30 88 - -
Sto10g0471 156 Pfam Myb-like DNA-binding domain 33 83 IPR001005 -
Sto10g0471 156 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 18 115 - -
Sto10g0471 156 SUPERFAMILY Homeodomain-like 29 86 IPR009057 -
Sto10g0471 156 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 18 115 IPR044848 GO:0003700
Sto10g0471 156 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 27 87 IPR017930 -
Sto10g0471 156 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 31 86 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0471 Sto-Chr10 3836583 3839877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0471 22 88 G2-like Transcription Factor Family AT2G42660 76.119 2.73e-31 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sto10g0471 Myb_DNA-binding 2.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0471 - - gmx:100795931 157.918