Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0465 ATGAGTGTGACGGAATTAGCAGGGGTGATATGGGATGCAGCCAAGTGTTTGTGTGATTTCAGTGCTAAGCATAGTGCTTTCATTTCCCATTTAGATGACAACTTCCAATCTTTAACAGATCGATGGACTCAGCTCCAAAACCTATGTCAAGATGTCAACACAAGACTTCAACTTGCTGAGACCAAGTCGCATATGCGAAGGACAAAGGAAGTCCATGTATGGTTACAAACTGTTAACTCCATGGAAGAGGTAGTGGAAGATATTAGGCAACGAGTTGCCAAACTAATCCATGTTACCTGTTTGCGCAAGCTCTGTTCAACAAACTGTTGTTCAACCTATAATCTGGGGCGGGAGATTACTGAGACATTAGATCGTGTAAATGAACTGATGAGTAGAGGACAAAAATTTGGTAACGATGTTACTATTGCTTATGAACTACCACCTGAGGTTGTAGATGAAATGCTTGTTCCCAAGACAGTGGGGATGGATTTAATGGTGAAGCAAGTAAAGGATAGCATTGAGGAAGAAGATGTGAGCATGATTGGGTTGTATGGCATGGGTGGGGTTGGAAAAACAACccttttgaagaaaataaataatgagtTTGCAAAGGGAACACATGATTTTACTCTGGTGATTTGGGTGGATGTGTCCAAAGATTTTGATACAGATAAAGTAATGGATGAGATTCGAAAGAAATGTGGAATTGATGACATCCATTGGAAGAACAGAAGTAGAAATGAGAGGGTGCAACAAATTTATAGGgttatgaagaagaagaagttcaTTCTGTTCTTGGATGATATTTGGAAGGTGTTAGAGTTGGAGAAGCTAGGAGTTCCGCCCCTAGAGGAACAAACCAACATCAACAAATCAAAAATCTTGTTCACAACACGCTTTGAAAATGTGTGTGACCAAATGCAGGCTAGGAAGTTCAAAGTCAAGTGTTTGACGGAGGAAGAAGCTTTCGATCTGTTTCGCATGAAGGTGGGTGAAGAAACTCTGAATTCTGATCCCAACATCCCGAGTTTAGCACGCGAGCTTATGCAAGAATGTAGAGGATTGCCGCTTGCACTAATCACGATAGGGCGAGCCATGGCTGGCCGGAGGAACCCACAATCATGGAGCCATGCAATAAAGGAGCTACGGAGTTTCCCTTCAGATGTTCTAGGTGTGGAGGAGGAAGTCTTCTTTACACTTCAATTCAGCTACGATCGTCTTCCCACTACGAAATTGAAAAAGTGTTTCTTGTATTGTGCATTGTACCCGGAAGATATCCGCATTAATGTTCATCACGTAATTCGCTTATGGATCGTAGAGGGGTTCTTCGGCGAGGTTGTTAGCTTCCGCAATGCCTATGATGAAGGCGAAGATATAGTTGAAAGCTTAAAGCTAGCATGTTTGTTAGAGCATGCTGGATATCCTTTTGTTCGGATGCATGATGTTGTTCGACACATGGCACTATGGTTGCTTCGTGATCAAGATCGAAACAAGAACAGAATTCTTGTTCAAGGTGAAGCACTAGGATTTTCACCAACTAATTATTCTCAAAAGTGGGAGTTTGCAGAAAGGATTTCGTTGGTCTATAGTAAAGCAAGTCACTGGCGTGTTCCAATTTGTCCTAAACTAGTCACTCTAATTATGCAAGACAACGCAAGTATCCAAGACTTTGCGAATGTGAAATTCATGAGCAGCTTAAAAATTCTAAGTCTAATCAATTCGAGTGTACGTGAACTTCCCTCTGAAATAGGTCAATTAAATTGTTTGGAATATCTCGAGTTGAATAACCTGTCATGCATTGAAAACAAGTTTCCAATGGAGATGAAAAATTTAGAACGCTTACAAGTTCTCTTGGTATGTAATGTTGGGTTTGGTCTTGAAAGCATTCCTTTAGAAGTGGTGTCAAGTTTTAAGAGATTGAAAGTATTCTACTATACTAAAAGTAACTCCATTGAAACAGAAACTCCGTCACAGAATATGACCATTAATCATTCATGCGAGAAATTATTTTTGGAGGAATTAGAGTTGCTACCATTGGAGGATGTCTCCCTCTCATTAGAGACTATTGATGGGGTTACCAAATTACTTACCTCTACTAAGTTGCAGCATTCTGTAACAGGAATGGACCTTAAACAATATTGGAATAGTAGCATCAACATTCCTTCATTAATGCCATCTATGAGAAACATGCAACATTTGGAGAGCATTACTTTGGTTGGATTACAAGATAATTTGGAAGAAGAGTCCTCAATTAatcacaatttcatttttcataaGCTTCGGTATGTCAGCATTTCGGATTGTCAATATATAACTCATTTGACATGGCTCAAGAATGCTCCACTCCTTTATGCGCTGACAATAGAAAAGTGTAATCTTATTGAACAAGTCATAAAGGAAACTGATCATGAAGACATGGATCGTACATTCTCAAATCTTACTCATgtgagattcagaaacttgccaAAGCTGAATAGCATCTCCAAGAAAGCCTTGTTTTTTAAGATGTTGCAGGTGATCAATATAAGAGATTGCTCAAGCTTAAAGAAGCTTCCTTTTCATTCCAACACTGcaaaaaatttgaagaaaatatGGGGAGAAACACAGTGGTGGCACAATTTAGAGTGGGAGGACTCAGCTACTAAGGACACATTCCATTCAAAATTTATAGAACTCAACTAG 2682 0.3833 MSVTELAGVIWDAAKCLCDFSAKHSAFISHLDDNFQSLTDRWTQLQNLCQDVNTRLQLAETKSHMRRTKEVHVWLQTVNSMEEVVEDIRQRVAKLIHVTCLRKLCSTNCCSTYNLGREITETLDRVNELMSRGQKFGNDVTIAYELPPEVVDEMLVPKTVGMDLMVKQVKDSIEEEDVSMIGLYGMGGVGKTTLLKKINNEFAKGTHDFTLVIWVDVSKDFDTDKVMDEIRKKCGIDDIHWKNRSRNERVQQIYRVMKKKKFILFLDDIWKVLELEKLGVPPLEEQTNINKSKILFTTRFENVCDQMQARKFKVKCLTEEEAFDLFRMKVGEETLNSDPNIPSLARELMQECRGLPLALITIGRAMAGRRNPQSWSHAIKELRSFPSDVLGVEEEVFFTLQFSYDRLPTTKLKKCFLYCALYPEDIRINVHHVIRLWIVEGFFGEVVSFRNAYDEGEDIVESLKLACLLEHAGYPFVRMHDVVRHMALWLLRDQDRNKNRILVQGEALGFSPTNYSQKWEFAERISLVYSKASHWRVPICPKLVTLIMQDNASIQDFANVKFMSSLKILSLINSSVRELPSEIGQLNCLEYLELNNLSCIENKFPMEMKNLERLQVLLVCNVGFGLESIPLEVVSSFKRLKVFYYTKSNSIETETPSQNMTINHSCEKLFLEELELLPLEDVSLSLETIDGVTKLLTSTKLQHSVTGMDLKQYWNSSINIPSLMPSMRNMQHLESITLVGLQDNLEEESSINHNFIFHKLRYVSISDCQYITHLTWLKNAPLLYALTIEKCNLIEQVIKETDHEDMDRTFSNLTHVRFRNLPKLNSISKKALFFKMLQVINIRDCSSLKKLPFHSNTAKNLKKIWGETQWWHNLEWEDSATKDTFHSKFIELN 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0465 893 PRINTS Disease resistance protein signature 180 195 - -
Sto10g0465 893 PRINTS Disease resistance protein signature 256 270 - -
Sto10g0465 893 PRINTS Disease resistance protein signature 352 366 - -
Sto10g0465 893 PRINTS Disease resistance protein signature 832 848 - -
Sto10g0465 893 PANTHER DISEASE RESISTANCE PROTEIN RP 16 881 IPR044974 GO:0006952
Sto10g0465 893 Gene3D - 404 488 IPR036388 -
Sto10g0465 893 SUPERFAMILY L domain-like 478 864 - -
Sto10g0465 893 Gene3D - 148 316 IPR027417 -
Sto10g0465 893 CDD AAA 160 272 - -
Sto10g0465 893 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 419 IPR027417 -
Sto10g0465 893 SMART AAA_5 177 340 IPR003593 -
Sto10g0465 893 Gene3D Ribonuclease Inhibitor 523 882 IPR032675 -
Sto10g0465 893 Pfam NB-ARC domain 165 405 IPR002182 GO:0043531
Sto10g0465 893 Gene3D - 317 403 IPR042197 -
Sto10g0465 893 PANTHER OS12G0491200 PROTEIN 16 881 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0465 Sto-Chr10 3782458 3785794 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0465 177 854 WRKY Transcription Factor Family AT5G45050 21.183 1.62e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0465 - K13459 mtr:MTR_4g091380 613.609