Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0425 ATGGAATCCACCTCCCACATTCATAAAGCCTTGCACAAATCAAATTCTATCAAGCAGTGGTCCAAGAACATGAATATTCTTAAAAATACTACTCCATCTTCAAGGGATCAAGTAGCTTTCTCTAACTGTGAGAAGCTTCTCGAACTTTCCATGCACAGACTTGGAGACTCAATGATGGCTCTTAGGAGTAAGAGTAATAGTACGAGGATCCCATTAGAATCCCAGCATGATGCTCACACGTGGCTTAGCAGTGTCCTTTCCTACCATGTCACGTGCTTGGAAGGGCTGGAGGGGTTACCAGCACGTGCTTTCATTGAGGCTGACCTGGAGAACTTAATATCGAGAGCAAAAACCTCATTAGACATGTTTGTTGCTATTTTCCCTCCAAAGGAAAAGGATTATGAACAAGCATTAGTTATAGCTCAGTTTCCTTCTTGGGTGGCGAGTGAGGATAGGAAGCTTTTagagtcttcttcttcttcggttAAGGATGTTATAAAACCCAACGTTGTGGTGGCTAAGGATGGGAGTGGAAACTTCAAGACAGTGAGTGAGGCTGTGGCTTCTGCACCTAATAACGCTCAAAGGAGGTTCGTTATTTTAGTTAAGAAAGGGACGTACGTTGAACAAGTTAACATCGGAAAAACAAAATCCAATTTGATGCTTGTTGGAGAAGGAATGGATGCTACAACTGTCACTGGTAGCTTGAATAATAAAGATGGACGACCCATATCCATCTCTGGCACTATATCTTCTGATGGTCCTGGATTAATTCTGAAAGACCTATGTATCCAAAACACAGCAGGACCACAAAAGGATCAAGCGGTGGCGCTACGGGCGAATGGGGACCGGACGGTGGTGTACCGGTGCCGCATCGAAGCCTTCCAAGACACACTGTACGCTCAATCACAAAGACAGTTCTACCGCGAGTGCATCATTGCAGGTACGGTGGACTTCATCTTCGGCGACGCATCCACCGTGATCCAGAACTCTAAAATCATAGCCCGAAGGCCCATGAATGGACAGTCCAACATAGTGACGGCCCAGAAACGAAGCTATCCTAAGGAAAACACAGGGACTTCGATTCAGCACTGCGATATAATACCGAGCCCAGAACTTGGGCCTGTGATTGGGGCCATCAAAACGTATCTGGGGCGTCCGTGGGGGAGTTTCTCGCGGACGGTGGTGATGGAGTCGTTCATTGATAAACATGTGGATCCAGCTGGATGGCAAGTTTGGTCGAGTGATGAAGATCCTATGGTGAAAACAAAGACATTGTATTACGGTGAGTATGCGAATAAGGGACCTGGCGCTGACATCAGCAGGAGAGTGAAATGGAGTGGTTTCCATGTGATTACTAACCGGGCTGATGCTTTCAGCTTCACTGTGGGACGGCTTATAAATGGTGGGGCATGGCTCCCTAGTACTGGGGTTCCCTTCGATGTGGGGCTTTAA 1455 0.4612 MESTSHIHKALHKSNSIKQWSKNMNILKNTTPSSRDQVAFSNCEKLLELSMHRLGDSMMALRSKSNSTRIPLESQHDAHTWLSSVLSYHVTCLEGLEGLPARAFIEADLENLISRAKTSLDMFVAIFPPKEKDYEQALVIAQFPSWVASEDRKLLESSSSSVKDVIKPNVVVAKDGSGNFKTVSEAVASAPNNAQRRFVILVKKGTYVEQVNIGKTKSNLMLVGEGMDATTVTGSLNNKDGRPISISGTISSDGPGLILKDLCIQNTAGPQKDQAVALRANGDRTVVYRCRIEAFQDTLYAQSQRQFYRECIIAGTVDFIFGDASTVIQNSKIIARRPMNGQSNIVTAQKRSYPKENTGTSIQHCDIIPSPELGPVIGAIKTYLGRPWGSFSRTVVMESFIDKHVDPAGWQVWSSDEDPMVKTKTLYYGEYANKGPGADISRRVKWSGFHVITNRADAFSFTVGRLINGGAWLPSTGVPFDVGL 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0425 484 CDD PMEI-like_4 7 126 - -
Sto10g0425 484 Pfam Pectinesterase 169 469 IPR000070 GO:0030599|GO:0042545
Sto10g0425 484 Gene3D - 163 484 IPR012334 -
Sto10g0425 484 ProSitePatterns Pectinesterase signature 2. 313 322 IPR033131 -
Sto10g0425 484 PANTHER PECTINESTERASE 19 480 - -
Sto10g0425 484 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 20 122 IPR035513 -
Sto10g0425 484 SUPERFAMILY Pectin lyase-like 166 483 IPR011050 -
Sto10g0425 484 SMART PMEI_2 6 122 IPR006501 GO:0004857
Sto10g0425 484 Pfam Plant invertase/pectin methylesterase inhibitor 17 102 IPR006501 GO:0004857
Sto10g0425 484 PANTHER PECTINESTERASE 19 480 - -
Sto10g0425 484 Gene3D Invertase/pectin methylesterase inhibitor family protein 4 127 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0425 Sto-Chr10 3424711 3426326 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0425 35 480 Carbohydrate Esterase AT1G11580 51.562 2.95e-163 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0425 K01051 - gmx:100815836 510.76