Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0419 ATGTCTTCTCTAACTTGGATCACATCGCTCTCTTGTTCGTCCCCTGAAACTTCCTTTCAATTCCTCAGATTTCTCTTCCTCTCTCCATGCCCTCAGAGAGCTCTCTTGTCAGCCATTGACGTTAtactcctcttcctcttcctccttctcgCTCTTAAGAAGCTCTTTTCAAGCTCCCACTCTCCAAGTTCTGAACTTGATAAGCCCCTGATCACTCAAAAGAGAGCTTTTCCCAGAATCACTTCTTGGTTTAAGCTTACTCTAGCTGCGACCGTTCTTCTTGCTGTTTTATACACTCTTGCTTCCGTTCTGGTATTTGTCAGAACCAAAACCAACGTGGTTTATTCATGGAAGCTGGTTGATGGAGTTTTCTGGTTGGTTCAGGCTATTACTTATGTGGTTCTCACAGTCTTAATCATCCATGAAAAACGAGTTCAAGCTATTGTTCATCCACTTCCACTTCGAATCTTCTGGGTAGTGTACTCTATTGTCACCTCCTTGTTTGTAGCTTCTGGGGTAATACGTTTTGTCTTAGTGGAAGAAGCTGGAGATTTCAGCTTCAAGATGGATGACATAATCTCCTTCATTTCTCTCCCTCTatcactttttctctcttgtgTTGCAATTAGAGGATCCACTGGCATTATTACAACATCCACAACAACATCCACCCAAGAAATTACCCAACCGCTACTAATTGATGGGGAAATCATTAAATCCTCCAACGTCTCTGCTTTCGCTTCGGCTTCTTTCATATCCAAGGCGTTTTGGCTATGGATTAACCCATTGTTAAGCAAAGGCTACAAATCCCCTTTGAAAATCGATGAAGTTCCTACACTTTCCCCACAACACAGAGCCGAAGTTATGTCTTTGTTGTTTGAATCCAAATGGCCTAAACCAGAAGAAGAGTCCAAGCATCCTGTGACTATCACATTGCTCCGATGTTTCTGGAAGCACGCTGCCTTAACCGCCATCCTCGCGGTGGTTCGACTCTGTGTCATGTTCGTAGGCCCTGTTCTTATACAGAGTTTCGTCGATTTCACATCAGGGAAGAGAAGCTCCGTCTATGAAGGATACTACTTAGTGTTGATCCTTCTCGTGGCTAAATTTGTAGAAGTTTTAAGCAGTCATCATTTCAACTTCACATGCCAGAAGCTTGGGATGCTTATCCGATGCACTCTGATTCCCACGTTGTACAAAAAGGGGTTAAGGATTTCCTGCTCTTCCCGACAAGATCATGGGATTGGGACAATCGTGAATTACATGTCCGTCGATGCTCAACAATTGTCGGACATGATGACGCAGATAAATGCTGTGTGGATGATGCCCATTCAAGTCACAATTTCCTTGGTTCTGCTTTCTAAATACCTGGGTGCTTCCGTGGTCACGGCTCTGTTTGGTGTTCTTGGGTTCCTCGCGTTCGCCGTGTAcaccaacaaaaaaaacttcCTTTTCCAATTCAACGTGATGAAGAATCGAGACACGAGAATGAAGGCCGTGAAtgagatgcttagttacatgcGCGTGATAAAGTTCCAAGCTTGGGAGGAACATTTCAAAAAGAGGATCATGAGTGCTCGTCAGAAGGAATTCGAATGGATTTCCAAGTTCGTGTATGTGTTTTCTGGGAATGTGATTGTGATGTGGAGCACACCAGTTTTGATTTCGACTTTGACATTCGGGACGGCACTTTTGCTTGGGGTGAATCTCGATGCAGCCACGGTCTTCACTGCGACTTCGATCTTTAAAATGTTGCAAGAACCTGTGAGGACATTCCCACAATCTATGAGCTCTCTTGCACAGGCGGTGATTTCGCTAGGGAGGTTGAATAGGTTCATGATGAGCAGGGAATTGGGTGATGATTCAGTGGAGAGGGAGGGAGGGTGTGGTGGGGGAATTGCTGTGGAGATTAAAGATGGAAACTTTAGTTGGGTGGATGATAGTGAGAAGGATTATGACTTGaacaacattaatttggagatcAAGAAAGGGGAACTTACGGCCATTGTTGGGACTGTGGGCTCAGGAAAATCTTCTATCCTCACTTCAATTCTTGGAGAGATGCATAAAGTCTCTGGAAAGGTTCGGGTTTGTGGGAGCACTGCCTACGTAGCACAAACATCATGGATTCAAAATGGGACAATTGAAGAGAACATCCTTTTTGGATTACCAATGGACAGACAGAAGTACAATAAAGTTGTGAAAGTTTGTAGCTTGGAGAAGGACTTGGAAATGATGGATGATGGAGATCAAACCGAGATAGGAGAGCGTGGGATCAACCTTAGTGGAGGCCAGAAGCAGAGGATACAACTAGCTAGAGCAGTGTATCAAGACACTGATATCTATCTTCTTGATGATGTCTTTAGTGCAGTTGATGCACAAACTGGCTCTGAAATATTCAAGGAATGTGTGAGGGGAGTTCTAAAAGGCAAGACCATTGTACTTGTCACACACCAAGTGGACTTCTTGCATAACGTTGATCTAATAGTGgtGATGAGGGATGGAATGATAGTCCAATCAGGGAAATACAATGATCTACTAGATTCTGGACTGGATTTTGGAGATTTAGTAGCTGCACATGAGACTTCTATGGAACTTGTAGAAGAAGGTACAATCATGCCCAGTGAAACTCCCCCCACACCATCCAAATCACCCAGAACTCCAAAGGCAGCTTCTTTCAAGAGAGAAACCAGTGGGAAAAAGAATTCTCTAGAACCACCAAAGCAAAGTTCAAAGCTCatcaaagaagaagagagggagacTGGGAAAGTGAGCTTGAATATCTATAAACTCTACTGCACAGAGGCCTATGGGTGGTGTGGCGTTATAGTAgtactcttcttttcttttgcatTACAAGGGTCACAAATGGCAGGTGATTACTGGCTAGCATATGAAACCTCAGAAGAAAGAGCTCAATCGTTTAACCCTTCTACTTTCATCTCCGTCTATGCAATTATTGCTGTGATTGCACTTGTTTTCGTCACATTGAGAGCCTTCTCTGTCAGCATCTTGGGGTTGAAGACAGCACAGATTTTCTTCACACAGATTATTAATTGCATCTTGCGTGCACCCATGTCTTTCTTTGACACTACTCCTTCAGGAAGAATTTTAAGTAGGGCATCCGTTGATCAAACGAGTGTTGATTTCATGATACCCATATTTATAAGTGCTGTTATTGCCATGTATATTTCAGTGCTGGGTATCCTCGTCGTCACTTGTCAAAACTCTTGGCCAACAGTTTTCTTTTTGATTCCTCTTGTTTGGTTGAACATATGGTACCGGAACTATTACCTTAGTTCATCTCGTGAATTGACTCGCTTGGATCAAATAACAAAAGCTCCCATCATTCATCACTTCTCAGAAACCATTTCTGGGGTTATGACAATCCGTGCATTCAGAAAGCAAATGCAATTTTCTGAAGAAAATGTTAAACGAGTGAACTCTAATCTGCGAATGGATTTCCATAATTTTAGTTCCAATGAGTGGTTGGGTTTTCGCCTAGAATTGCTTGGAAGCCTACTCTTATGTGTTTCTACTATGTTCATGATCTTGTTACCCAGCACTATCATAAAGCCAgAAAATGTTGGTTTAACACTATCTTATGGATTATCCCTAAATACTGTGCTGTTCTTGTCTATATACATGAGTTGCACCCTTGAAAACAAAATGGTTTCTGTTGAGAGGATTAAGCAGTTCACAGTAATTCCATCAGAAGCAGAATGGAATATTAAAGATCGTCTGCCTCCTCCAAATTGGCCTCACCATGGCAATGTTAATATCAATGACTTGCAGGTTAGGTATCGTCCAAACACTCCTCTGGTTCTGAAAGGCATTACTCTGAGCATTAATGGGGGAGAAAAGATTGGTGTTGTTGGTCGTACAGGAAGTGGGAAGTCAACATTAATTCAAGTTTTCTTTAGGTTGGTGGAACCTTCAGGAGGCAGAATAGTGATTGATGACATTGACATCACTGCCTTAGGACTTCATGATCTCAGGTCTCGGTTTGGTATTATTCCTCAAGAACCTGTCCTTTTCGAGGGAACCGTTAGAAGTAACATCGATCCACTTGGTCAATACACAGATGAAGAAATATGgaagAGTTTGGAACGGTGTCAACTAAAAGATGCGGTGGCTTCAAAGCCGGAGAAACTCGATTCTTTAgTGGTTGATAATGGAGAGAACTGGAGTGTGGGACAAAGGCAATTGTTGTGTTTAGGAAGGGTTATGCTTAAACGAAGTCGTTTATTGTTCATGGATGAAGCAACAGCTTCTGTGGATTCACAAACTGATGCTATGATTCAAAAGATCATAAGAGAGGACTTTGCAGCATGTACCATCATTAGCATTGCTCACAGAATTCCAACTGTTATGGATTGTGATAGAGTTTTGGTGGTAGATGCAGGGCGAGCAAAAGAATTTGACAAACCCTCCAACTTGCTTACATGGTCATCACTATTTGCTGCATTAGTTCAAGAATATGCCATTCGTTCTTCCGAACTCTAA 4506 0.4106 MSSLTWITSLSCSSPETSFQFLRFLFLSPCPQRALLSAIDVILLFLFLLLALKKLFSSSHSPSSELDKPLITQKRAFPRITSWFKLTLAATVLLAVLYTLASVLVFVRTKTNVVYSWKLVDGVFWLVQAITYVVLTVLIIHEKRVQAIVHPLPLRIFWVVYSIVTSLFVASGVIRFVLVEEAGDFSFKMDDIISFISLPLSLFLSCVAIRGSTGIITTSTTTSTQEITQPLLIDGEIIKSSNVSAFASASFISKAFWLWINPLLSKGYKSPLKIDEVPTLSPQHRAEVMSLLFESKWPKPEEESKHPVTITLLRCFWKHAALTAILAVVRLCVMFVGPVLIQSFVDFTSGKRSSVYEGYYLVLILLVAKFVEVLSSHHFNFTCQKLGMLIRCTLIPTLYKKGLRISCSSRQDHGIGTIVNYMSVDAQQLSDMMTQINAVWMMPIQVTISLVLLSKYLGASVVTALFGVLGFLAFAVYTNKKNFLFQFNVMKNRDTRMKAVNEMLSYMRVIKFQAWEEHFKKRIMSARQKEFEWISKFVYVFSGNVIVMWSTPVLISTLTFGTALLLGVNLDAATVFTATSIFKMLQEPVRTFPQSMSSLAQAVISLGRLNRFMMSRELGDDSVEREGGCGGGIAVEIKDGNFSWVDDSEKDYDLNNINLEIKKGELTAIVGTVGSGKSSILTSILGEMHKVSGKVRVCGSTAYVAQTSWIQNGTIEENILFGLPMDRQKYNKVVKVCSLEKDLEMMDDGDQTEIGERGINLSGGQKQRIQLARAVYQDTDIYLLDDVFSAVDAQTGSEIFKECVRGVLKGKTIVLVTHQVDFLHNVDLIVVMRDGMIVQSGKYNDLLDSGLDFGDLVAAHETSMELVEEGTIMPSETPPTPSKSPRTPKAASFKRETSGKKNSLEPPKQSSKLIKEEERETGKVSLNIYKLYCTEAYGWCGVIVVLFFSFALQGSQMAGDYWLAYETSEERAQSFNPSTFISVYAIIAVIALVFVTLRAFSVSILGLKTAQIFFTQIINCILRAPMSFFDTTPSGRILSRASVDQTSVDFMIPIFISAVIAMYISVLGILVVTCQNSWPTVFFLIPLVWLNIWYRNYYLSSSRELTRLDQITKAPIIHHFSETISGVMTIRAFRKQMQFSEENVKRVNSNLRMDFHNFSSNEWLGFRLELLGSLLLCVSTMFMILLPSTIIKPENVGLTLSYGLSLNTVLFLSIYMSCTLENKMVSVERIKQFTVIPSEAEWNIKDRLPPPNWPHHGNVNINDLQVRYRPNTPLVLKGITLSINGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIVIDDIDITALGLHDLRSRFGIIPQEPVLFEGTVRSNIDPLGQYTDEEIWKSLERCQLKDAVASKPEKLDSLVVDNGENWSVGQRQLLCLGRVMLKRSRLLFMDEATASVDSQTDAMIQKIIREDFAACTIISIAHRIPTVMDCDRVLVVDAGRAKEFDKPSNLLTWSSLFAALVQEYAIRSSEL 1501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0419 1501 ProSitePatterns ABC transporters family signature. 761 775 IPR017871 GO:0005524
Sto10g0419 1501 Gene3D ABC transporter type 1, transmembrane domain 299 617 IPR036640 GO:0005524|GO:0016021
Sto10g0419 1501 Gene3D ABC transporter type 1, transmembrane domain 906 1240 IPR036640 GO:0005524|GO:0016021
Sto10g0419 1501 Pfam ABC transporter transmembrane region 942 1186 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto10g0419 1501 Pfam ABC transporter transmembrane region 324 589 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto10g0419 1501 PANTHER ABC TRANSPORTER C FAMILY MEMBER 4 77 1500 - -
Sto10g0419 1501 SMART AAA_5 1285 1469 IPR003593 -
Sto10g0419 1501 SMART AAA_5 663 844 IPR003593 -
Sto10g0419 1501 CDD ABCC_MRP_domain2 1257 1477 - -
Sto10g0419 1501 CDD ABCC_MRP_domain1 635 835 - -
Sto10g0419 1501 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1251 1492 IPR027417 -
Sto10g0419 1501 Coils Coil 1130 1150 - -
Sto10g0419 1501 CDD ABC_6TM_ABCC_D2 942 1234 IPR044726 GO:0140359
Sto10g0419 1501 MobiDBLite consensus disorder prediction 869 916 - -
Sto10g0419 1501 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 321 601 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto10g0419 1501 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 77 1500 - -
Sto10g0419 1501 Gene3D - 1243 1493 IPR027417 -
Sto10g0419 1501 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1259 1493 IPR003439 GO:0005524
Sto10g0419 1501 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 635 857 IPR027417 -
Sto10g0419 1501 SUPERFAMILY ABC transporter transmembrane region 310 613 IPR036640 GO:0005524|GO:0016021
Sto10g0419 1501 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 637 859 IPR003439 GO:0005524
Sto10g0419 1501 CDD ABC_6TM_ABCC_D1 322 609 IPR044746 GO:0140359
Sto10g0419 1501 SUPERFAMILY ABC transporter transmembrane region 940 1239 IPR036640 GO:0005524|GO:0016021
Sto10g0419 1501 Gene3D - 621 872 IPR027417 -
Sto10g0419 1501 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 943 1222 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto10g0419 1501 Pfam ABC transporter 654 787 IPR003439 GO:0005524
Sto10g0419 1501 Pfam ABC transporter 1276 1424 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0419 Sto-Chr10 3373846 3393865 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0419 635 1492 Calmodulin-binding Proteins AT2G36910 24.246 1.23e-61 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0419 - K05666 gmx:100793361 2142.85