Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0414 ATGGCTCGTTCTCCGATGGAGCTTCTGCTTCCCATATCCATtcaacttcttcttctattCACCATTTCTTTCCTCTCAGGCGTTACCTTCGCTGACCCACCTTATAATATTTGTTCAACAACCACCAAATACACCAAAGATAGCTCCTTTTACTTCAACCTTAACGATCTCCTTCTTTCTCTACCCTCCAATGCTTCAATCTTCAAATCCCATAGTGTCTCCTATGGAAACGACACAGACAGAGTTTATAGCCTCTTCATGTGCCTCGACTATGTCTCCAACCAAACCTGCCAGGATTGCATAGCCACAGCATCACAAGACATTCTTAAACTCTGTCCAGAAGCAGAGGAAGCGACTGTTTGGGAAGAGGTATGCCAGCTACGTTATTCCAACCAGAATTTCTATGGAAAAGTTAATGTCACAGGAAACATGGGGAAGAGTAATATACAGAATACTTCTGAACCAGACAAGTTTGAGTCTGTGGTGAATGGGTTGTTGTATAATCTTACTGAGGTAGCATCTTTTAATGTTTCTGCTGATTTCTATGCCGTTGGACATGTTCCCTTTCAAGAGGAAACCTTGTATGGTATAGTTCAGTGTACGAGGGATTTGTCAGCTAGTGATTGCAGTAGATGCTTGAAAAGTGCCATCAGTGACATACCAAATTGTTGCTATTCCTCCATTGGTGCTAGAGTTCTAAGTCGTAGCTGTTACTTGAGATTTGAATTTTACGCTTTTTATAATGGTGAACCTGGTCCTAATGATTCTTCAGCTGgtcaaggaaaaagaaaaaGTAAATCAAGCAAAACTTGGATGATTTCTGGCATTATAGTGACGGTGGGCTTGGTGTTAGCAATTCTGAGTTGCTGCATTTATTTTCTGAGGAAGAAGAGAAATCAGAAAAGTAAGAATGGACTAGAGAGTAATTTATTCGATCTAAATAGCTTCGGGCAGCAAGGTGATACAGTGTTCCATCACCAGAATTTTCGCGGTAGAAATGATAAGATATCTGAGGACTTGCCTTATTTTGATCTTGAAACTCTCTGTGTGGCTACCAAAAACTTCTCTGATTCAAATAAGCTTGGCCAAGGTGGATTTGGACCTGTTTACAAGGGCATACTAAGTAATGGCCAGGAAGTAGCAATCAAGAGGCTTTCAACGGTCTCCGAACAAGGCTCGGACGAATTCATCAATGAAGTTCTTCTGATATTGAAGCTTCAACATAAAAACCTTGTGAAGCTTCTGGGATTTTGTTTAGATGGAGAAGAAATGCTTCTTGTTTATGAATTTTTGCCCCATGGAAGCCTTGATGTTGTCCTTTTCGGAACTGAAGGTGAAGCTAACACTGCTACTATAGTAGGCACCTAtGGATACATGGCTCCAGAGTATGCTATGGAGGGACTTTATTCCATAAAATCCGATGTTTTTGGCTTTGGAGTGCTATTGCTTGAGATTATCACCGGGAGACGCAGCGCCGAAAAGCCACCTTTCTGTGTGGGGAGAGTCACTGATAATGATCATGATCATGATGAGCCAGAAAGTGAACTATACTCAGTCAATAACTTAACTGTTTCTGATATATTGCCAAAGTGA 1593 0.4036 MARSPMELLLPISIQLLLLFTISFLSGVTFADPPYNICSTTTKYTKDSSFYFNLNDLLLSLPSNASIFKSHSVSYGNDTDRVYSLFMCLDYVSNQTCQDCIATASQDILKLCPEAEEATVWEEVCQLRYSNQNFYGKVNVTGNMGKSNIQNTSEPDKFESVVNGLLYNLTEVASFNVSADFYAVGHVPFQEETLYGIVQCTRDLSASDCSRCLKSAISDIPNCCYSSIGARVLSRSCYLRFEFYAFYNGEPGPNDSSAGQGKRKSKSSKTWMISGIIVTVGLVLAILSCCIYFLRKKRNQKSKNGLESNLFDLNSFGQQGDTVFHHQNFRGRNDKISEDLPYFDLETLCVATKNFSDSNKLGQGGFGPVYKGILSNGQEVAIKRLSTVSEQGSDEFINEVLLILKLQHKNLVKLLGFCLDGEEMLLVYEFLPHGSLDVVLFGTEGEANTATIVGTYGYMAPEYAMEGLYSIKSDVFGFGVLLLEIITGRRSAEKPPFCVGRVTDNDHDHDEPESELYSVNNLTVSDILPK 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0414 530 ProSiteProfiles Protein kinase domain profile. 355 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g0414 530 SUPERFAMILY Protein kinase-like (PK-like) 335 491 IPR011009 -
Sto10g0414 530 ProSiteProfiles Gnk2-homologous domain profile. 140 246 IPR002902 -
Sto10g0414 530 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 446 493 - -
Sto10g0414 530 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 18 444 - -
Sto10g0414 530 Gene3D Transferase(Phosphotransferase) domain 1 434 525 - -
Sto10g0414 530 Pfam Salt stress response/antifungal 38 132 IPR002902 -
Sto10g0414 530 Pfam Salt stress response/antifungal 148 243 IPR002902 -
Sto10g0414 530 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 10 ISOFORM X1 446 493 - -
Sto10g0414 530 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 10 ISOFORM X1 18 444 - -
Sto10g0414 530 Gene3D - 141 246 IPR038408 -
Sto10g0414 530 Gene3D - 33 134 IPR038408 -
Sto10g0414 530 ProSiteProfiles Gnk2-homologous domain profile. 32 134 IPR002902 -
Sto10g0414 530 Gene3D Phosphorylase Kinase; domain 1 320 430 - -
Sto10g0414 530 Pfam Protein tyrosine and serine/threonine kinase 358 443 IPR001245 GO:0004672|GO:0006468
Sto10g0414 530 Pfam Protein tyrosine and serine/threonine kinase 456 490 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0414 Sto-Chr10 3325925 3328501 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0414 440 492 Receptor kinase-like Gene Family AT4G05200 61.111 1.05e-14 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto10g0414 PK_Tyr_Ser-Thr 2.4e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0414 - - gmx:102669364 518.464