Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0413 ATGCTTATCTTCATCATTCCCATCTTAtttttccaccatgtttctggTTCAGACCCTCTTTTCATTTGGTGTCCAAGTGAAATCCCAGATTACACACCCAACACTCCATTTCATAACAACCTGAAGCTTCTTCTGGAATCACTTTCCTCTAACATTTCCACTTCAGGTTACTACAACACTTCCATTGGAGAGGAACAAGACAAGGTATATGGACAAGCACTATGCAGAGGAGACATAAACTCCAAAATTTGTGAGAAATGTGTTGAGGAAGCAAGCCAAGACATACTCAACAAATGTAGAAGCCAAGATGCTATCATTTGGTATGAGCTTTGTCAAGTAAGGTACTCCTTTCAGATGTTCATTTCGAGGATGGTATATACCGGGAAGTTTCCAGAAGTGGACAATCAGGAGAAGAATGTGTCGAAAGATCCTAAAAGGTTCAGTGAGGTTTTGATGTATTTAATGAATAACCTGTCCTATGAGGCTGCTTTTGTTCCTTCCAAGAACATGTTTGCTTCTGGGGAAATCGAATTTTCCCGGAAAATTACTATTTATGGTCTTGTTCAATGCACAAGGGACATCTCTGACACATCATGCTATAACTGTTTGAGTTCTGCACTTGGAGATCTTTCTGCTTGTTGCTCACACCGTGAAGGTGGGATTGTTCTTAGTAGAACTTGCAATGTGAGGTTTGAGCTATCTCAGTTCTTTAATGCTTCTTCACAGTACCTTTTGGTTTATCCAAGTTCTAAAGGAGGCAAATGGAAGGCTTGGATGGTTGTGTTGATTATATGTGCATCAATGTTAGTATTAGCAGTTGTTATTGGGTTGTGCATTGCTTATTTCCTCAGAAAACAAGGGAGCGAAAGAGATGAAGAGAAAACAGAACAGATGCTACTTCATCAATTGGCAACCCCCAGGAGTGTAACAATTACACAAGATGGAGAATTAATCAGCTCTGAGGAACTTGTGTTCATAAGCTTAGCAGCAATCAAGGAAGCTACTGGTAATTTCTCTGATACAAACAAGCTAGGACAAGGAGGTTTTGGTGCAGTGTACAAGGGTGTTCTACCAGATGGGAATGAAGTAGCAGTGAAAAGGTTATCAAGAAAGTCTTGGCAAGGCATAGAGGAATTCAAGAATGAGGTCAGTCTCATTGCAAAACTTCAACACAAGAATCTGGTGAAGCTATTGGGATATGGATTGGAGGGAGAGGAAAAGTTTCTCATATATGAATTCATGGCCAACAAAAGCCTTGACAAATTTATCTTTGaTTCAGAAAAACGTTCACAGCTTGATTGGAAGACATGCTATGGCATCATCATTGGGATAGCTAGAGGATTACTTTATCTTCATGAAGAATCTAGGCTAAGGATCATTCATAGAGATTTGAAGCCAAACAACGTGTTGCTTGATCGTGATATGGTCGCAAAAATATCAGATTTCGGTATGGCTAGAATCTTTTGTGAGAATCAAAATGCTGCTAATACCAAGAGAGTTGTGGGAACATAG 1512 0.3909 MLIFIIPILFFHHVSGSDPLFIWCPSEIPDYTPNTPFHNNLKLLLESLSSNISTSGYYNTSIGEEQDKVYGQALCRGDINSKICEKCVEEASQDILNKCRSQDAIIWYELCQVRYSFQMFISRMVYTGKFPEVDNQEKNVSKDPKRFSEVLMYLMNNLSYEAAFVPSKNMFASGEIEFSRKITIYGLVQCTRDISDTSCYNCLSSALGDLSACCSHREGGIVLSRTCNVRFELSQFFNASSQYLLVYPSSKGGKWKAWMVVLIICASMLVLAVVIGLCIAYFLRKQGSERDEEKTEQMLLHQLATPRSVTITQDGELISSEELVFISLAAIKEATGNFSDTNKLGQGGFGAVYKGVLPDGNEVAVKRLSRKSWQGIEEFKNEVSLIAKLQHKNLVKLLGYGLEGEEKFLIYEFMANKSLDKFIFDSEKRSQLDWKTCYGIIIGIARGLLYLHEESRLRIIHRDLKPNNVLLDRDMVAKISDFGMARIFCENQNAANTKRVVGT 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0413 503 ProSiteProfiles Gnk2-homologous domain profile. 128 236 IPR002902 -
Sto10g0413 503 ProSitePatterns Protein kinases ATP-binding region signature. 344 366 IPR017441 GO:0005524
Sto10g0413 503 Gene3D Phosphorylase Kinase; domain 1 301 413 - -
Sto10g0413 503 SUPERFAMILY Protein kinase-like (PK-like) 320 503 IPR011009 -
Sto10g0413 503 Pfam Salt stress response/antifungal 29 117 IPR002902 -
Sto10g0413 503 Pfam Salt stress response/antifungal 139 232 IPR002902 -
Sto10g0413 503 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 1 503 - -
Sto10g0413 503 ProSiteProfiles Protein kinase domain profile. 338 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g0413 503 Gene3D Transferase(Phosphotransferase) domain 1 414 503 - -
Sto10g0413 503 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 503 - -
Sto10g0413 503 Pfam Protein kinase domain 339 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g0413 503 SMART serkin_6 338 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g0413 503 ProSiteProfiles Gnk2-homologous domain profile. 19 120 IPR002902 -
Sto10g0413 503 Gene3D - 132 236 IPR038408 -
Sto10g0413 503 Gene3D - 22 120 IPR038408 -
Sto10g0413 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0413 Sto-Chr10 3321800 3324407 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0413 3 503 Receptor kinase-like Gene Family AT4G05200 42.447 1.77e-126 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto10g0413 Pkinase 1.4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0413 - - lja:Lj1g3v0052350.1 708.368