Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0412 ATGCGTTCCTTCCTCTTATTCCTACTACTCCTAACCATCTTTTCCCTGTCCATACACAGTGCTCCCATCCAAACTGCTATCCGTAGATCTCCCACAACTTACTACAACTGCACAAGCAATTACACTCCCTCTCCCAATAATTCCTACCGTTCTAACATCAAAACTCTCTTAGATTGGCTCTCCTCCAATAGCACTAGCAAAGACAGATTCTACAACACCACAGTTTCAAGTAAAAACACAGCTGGCACCGTCTATGGCCTCTTCTTCTGTCAACGATACACCAAGATAAATCTCTGTCAAGAGTGTGTGATTGAAGCAGCCAAATTAATGTCAACACTATGTAATGTGGCAAAAGAAGCCATAGTTTGGCACAAAATATGCTTCTTGCGCTACTCTAATAGGTATTTCTTCTCTACTGTGGAGACAAGTCCTAAAATTTCCTTTATGAATGATAAGGACTACGAGGGTCAGGTTGGCCACTTCAACAATATACTTTGGGATATGATGAACAATCTAAGAACTGAGGCAGCCAGTGCTTCAGAAAAATTTGCAGTCCAGTCAATCAACATTACAGTAAATCAAACCTTATATGGCTCAGCATGGTGCATGCCATACCTATCCACTGAGAATTGCAGTTGGTGTCTCAGTGATGCCATTGCAGAAATTCCAACTTCCTGCTGTAGAGGGAAAACTGGAGGAAGAGTTATTTATCCCAGTTGTAGCGTTAGATATGAACTATTTCCATTCTTCAACACATCTACTTGGGAACCACTGCTACTGTCACCGCCACCTCCTCATTCTCCCCCTTCAACAACAACAGcaggaaaaagaaaacaacagaCACTAACTATATTTGAGGTTGTTGTCCCAATTGTTATTTCATTGGTGCTATTATCTTTGGGATGCTACTGTTTTCTacgaaagaaaggaagaaagaaccAGGAGGATATTCTCAAACAAAGCTGTAATGAGGGTGTGGTTGGGCATGATACAACCACTCTGGAGTCCTTGCGATATGATTTAGCGAAAATTGAAGCTGCAACAAACAAGTTCTCTAAAGAAAACATGATAGGCAAAGGTGGATTTGGAGAAGTTTTTAAGGGTGTTCTACCAGATGGGAATGAAGTAGCAGTGAAAAGGTTATCAAGAAAGTCTTGGCAAGGCATAGAGGAATTCAAGAATGAGGTCAGTCTCATTGCAAAACTTCAACACAAGAATCTGGTGAAGCTATTGGGATATGGATTGGAGGGAGAGGAAAAGTTTCTCATATATGAATTCATGGCCAACAAAAGCCTTGACAAATTTATCTTTGaTTCAGAAAAACGTTCACAGCTTGATTGGAAGACATGCTATGGCATCATCATTGGGATAGCTAGAGGATTACTTTATCTTCATGAAGAATCTAGGCTAAGGATCATTCATAGAGATTTGAAGCCAAACAACGTGTTGCTTGATCGTGATATGGTCGCAAAAATATCAGATTTCGGTATGGCTAGAATCTTTTGTGAGAATCAAAATGCTGCTAATACCAAGAGAGTTGTGGGAACATAG 1551 0.3933 MRSFLLFLLLLTIFSLSIHSAPIQTAIRRSPTTYYNCTSNYTPSPNNSYRSNIKTLLDWLSSNSTSKDRFYNTTVSSKNTAGTVYGLFFCQRYTKINLCQECVIEAAKLMSTLCNVAKEAIVWHKICFLRYSNRYFFSTVETSPKISFMNDKDYEGQVGHFNNILWDMMNNLRTEAASASEKFAVQSINITVNQTLYGSAWCMPYLSTENCSWCLSDAIAEIPTSCCRGKTGGRVIYPSCSVRYELFPFFNTSTWEPLLLSPPPPHSPPSTTTAGKRKQQTLTIFEVVVPIVISLVLLSLGCYCFLRKKGRKNQEDILKQSCNEGVVGHDTTTLESLRYDLAKIEAATNKFSKENMIGKGGFGEVFKGVLPDGNEVAVKRLSRKSWQGIEEFKNEVSLIAKLQHKNLVKLLGYGLEGEEKFLIYEFMANKSLDKFIFDSEKRSQLDWKTCYGIIIGIARGLLYLHEESRLRIIHRDLKPNNVLLDRDMVAKISDFGMARIFCENQNAANTKRVVGT 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0412 516 Gene3D - 30 136 IPR038408 -
Sto10g0412 516 Gene3D - 145 249 IPR038408 -
Sto10g0412 516 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 10 516 - -
Sto10g0412 516 ProSitePatterns Protein kinases ATP-binding region signature. 357 379 IPR017441 GO:0005524
Sto10g0412 516 Pfam Salt stress response/antifungal 157 245 IPR002902 -
Sto10g0412 516 Pfam Salt stress response/antifungal 37 133 IPR002902 -
Sto10g0412 516 ProSiteProfiles Protein kinase domain profile. 351 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g0412 516 ProSiteProfiles Gnk2-homologous domain profile. 31 136 IPR002902 -
Sto10g0412 516 SMART serkin_6 351 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g0412 516 SUPERFAMILY Protein kinase-like (PK-like) 333 516 IPR011009 -
Sto10g0412 516 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Sto10g0412 516 Gene3D Transferase(Phosphotransferase) domain 1 427 516 - -
Sto10g0412 516 Gene3D Phosphorylase Kinase; domain 1 312 426 - -
Sto10g0412 516 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 10 516 - -
Sto10g0412 516 ProSiteProfiles Gnk2-homologous domain profile. 142 249 IPR002902 -
Sto10g0412 516 Pfam Protein kinase domain 352 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0412 Sto-Chr10 3321800 3341590 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0412 3 516 Receptor kinase-like Gene Family AT4G05200 43.931 4.21e-139 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto10g0412 Pkinase 5.4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0412 - - gmx:100793219 625.55