Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0403 ATGGCACCAGAGTATGCAAGGCATGGACAATTCTCTGTAAAATCAGATGTCTTCAGCTTTGGAGTCCTTATTCTAGAGATCATAAGTGGCCAGAAGAATGGTAGATTTCATAATGGGGAGAATGTGGAGCATTTGCTAAGCTTTAATACAAGTTCATCAAGTTCACCATATTCAACAAGTTCAAGTGATCAAAATAGTAAATCTGTTGAAGTATTATCAGTCAATGAGGTCTCAATATCTGACCTATATCCTCGCTAG 258 0.376 MAPEYARHGQFSVKSDVFSFGVLILEIISGQKNGRFHNGENVEHLLSFNTSSSSSPYSTSSSDQNSKSVEVLSVNEVSISDLYPR 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0403 85 ProSiteProfiles Protein kinase domain profile. 1 85 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g0403 85 MobiDBLite consensus disorder prediction 49 68 - -
Sto10g0403 85 Pfam Protein tyrosine and serine/threonine kinase 1 44 IPR001245 GO:0004672|GO:0006468
Sto10g0403 85 Gene3D Transferase(Phosphotransferase) domain 1 1 79 - -
Sto10g0403 85 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 10 ISOFORM X1 1 48 - -
Sto10g0403 85 SUPERFAMILY Protein kinase-like (PK-like) 1 35 IPR011009 -
Sto10g0403 85 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0403 Sto-Chr10 3253545 3262439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0403 1 47 Receptor kinase-like Gene Family AT4G23140 65.957 1.76e-16 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto10g0403 PK_Tyr_Ser-Thr 2.1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0403 - - gmx:100782800 86.6557