Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0345 ATGCTTCGCTCTTGCTATTCCTCGCTCAAGCGTTGCTTCGGCCGCGCCGGTGTTGGTGGCGACGGTCTTCTCTGGCACACCGACTTGAAGCCGCACGCCTCCGGCGACTTCTCCATCGCCGTCGCTCAGGCCAATCTCAGGCTCGAAGATCAGAGCCAGGTCTTTACGTCTCCGTCCGCCACCTACATCGGTGTCTACGATGGCCATGGCGGTCCCGAAGCTTCTAGATTCGTCAATAAACACCTATTTCGTCATCTAGATGAATTTTCCGTTCAAAATGGGGGATTATCGGTGGATGTGATAAAAAAGGCGTTTAATGTGATTGAGGAGGACTTTTTGCGGCATGTGAAGCGAAAATTGCATACAACTCCCAAAATTGCCTCAGTGGGATCGTGTTGTCTTCTTGGTGCAATTTCTgataatgtattatatattgcgAATCTTGGAGACTCTAGAGTAGTTCTTGGCCGGAAAACTTCTCACGGAGAGAAACATAAGGTGGTGGCACAGCGGTTGTCAACTGATCATAATGTAGCAGTTGAGGAGGTAAGGAAAGAAGTTGAATCACTCCATCCAGATGATGCACAAGTAGTTGTTTTCACCCGTGGAACTTGGAGGATTAAAGGCATAATAcagGTGTCAAGGTCTATTGGTGATGTGTATCTCAAGAAACCTGAATTTTATAGCGACCCAATTTTCCAGAAATACGGAAACCCTATACCTTTAAAGCGTCCGGTAATGACAGCCGAACCTTCGGTCCTCGTTAAGGAGCTTGAGCCACAAGATTCATTCCTGATATTTGCATCAGATGGCCTTTGGGAACAActaactgatgaagaggcagtTGAGATTGTTTACAAACATCCGAGAGCAATTTCGAGTTATTTATGGTCGTGGATGATGTTTCAGGGAATCGCCAAGAGATTGGCATTACATCAAACAGCTTGTCTTCGCGGAAACCATCCGTTTGAAATCGCGCTCCTAACCTAA 990 0.4485 MLRSCYSSLKRCFGRAGVGGDGLLWHTDLKPHASGDFSIAVAQANLRLEDQSQVFTSPSATYIGVYDGHGGPEASRFVNKHLFRHLDEFSVQNGGLSVDVIKKAFNVIEEDFLRHVKRKLHTTPKIASVGSCCLLGAISDNVLYIANLGDSRVVLGRKTSHGEKHKVVAQRLSTDHNVAVEEVRKEVESLHPDDAQVVVFTRGTWRIKGIIQVSRSIGDVYLKKPEFYSDPIFQKYGNPIPLKRPVMTAEPSVLVKELEPQDSFLIFASDGLWEQLTDEEAVEIVYKHPRAISSYLWSWMMFQGIAKRLALHQTACLRGNHPFEIALLT 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0345 329 CDD PP2Cc 41 310 IPR001932 -
Sto10g0345 329 ProSitePatterns PPM-type phosphatase domain signature. 62 70 IPR000222 GO:0043169
Sto10g0345 329 SUPERFAMILY PP2C-like 45 290 IPR036457 -
Sto10g0345 329 SMART PP2C_4 30 318 IPR001932 -
Sto10g0345 329 Pfam Protein phosphatase 2C 58 288 IPR001932 -
Sto10g0345 329 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 3 291 - -
Sto10g0345 329 ProSiteProfiles PPM-type phosphatase domain profile. 36 329 IPR001932 -
Sto10g0345 329 PANTHER ALPHABET, ISOFORM E-RELATED 3 291 - -
Sto10g0345 329 Gene3D - 28 321 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0345 Sto-Chr10 2752965 2756877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0345 21 318 PP2C-type Phosphatase Gene Family AT3G51370 52.903 2.48e-111 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0345 - K01102 cpap:110806704 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0345 10 2752965 2756877 Sto10g0345 10 2752965 2756877 ECH
Sto2g0517 2 4447811 4449708 Sto10g0345 10 2752965 2756877 ECH