Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0331 ATGATCATCCAGGAAGATGAAAATGGTGTTGTGACAGCACAGGATCAACAAGAGGGTGAAGTGATGAAcaatgaagaagaaggaagtgAAGATGAAGATTCACAAAAGTGGTTGAACTTGAACTTGAGTTTagcaggaggaggaggaggagactCTGAATCATCATCACAAGCAAaatcagcagcagcagcagcaactATTAAGACTTTCTCATGCAACTTCTGCATGAGGAAGTTCTTTAGTTCACAAGCACTAGGAGGCCATCAGAATGCTCACAAGAGAGAAAGAGTAGCAGCAAGAAGATACCATCAATCTCAGAAGATGATGACATTGATGGGTTTGTCTTCTATGAGCAGTCCCATGTTTAGATCACTTGGAGTTCAGCCTCATTCACTCAAGCCTTGCAGTAGAGGTATAACAACAACTACTACTACTACAATGGCAGCCAGCTTTCATGAAGCTTCTTATGGAATGGGGTGGAATCCTTTCATGCCTGAGGATCAAACACATCCCGTTTGGCCCGGAAGCTTCCGTTTGGATCCGCAACAACCCGACCCGAAACAAGCCTCTCCCAAGCTTGATTTAGACCTCCGGCTTTGA 600 0.39 MIIQEDENGVVTAQDQQEGEVMNNEEEGSEDEDSQKWLNLNLSLAGGGGGDSESSSQAKSAAAAATIKTFSCNFCMRKFFSSQALGGHQNAHKRERVAARRYHQSQKMMTLMGLSSMSSPMFRSLGVQPHSLKPCSRGITTTTTTTMAASFHEASYGMGWNPFMPEDQTHPVWPGSFRLDPQQPDPKQASPKLDLDLRL 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0331 199 ProSiteProfiles Zinc finger C2H2 type domain profile. 70 97 IPR013087 -
Sto10g0331 199 Gene3D Classic Zinc Finger 52 118 - -
Sto10g0331 199 SUPERFAMILY beta-beta-alpha zinc fingers 68 97 IPR036236 -
Sto10g0331 199 MobiDBLite consensus disorder prediction 171 199 - -
Sto10g0331 199 PANTHER ZINC FINGER PROTEIN 4-LIKE 5 199 - -
Sto10g0331 199 MobiDBLite consensus disorder prediction 1 34 - -
Sto10g0331 199 ProSitePatterns Zinc finger C2H2 type domain signature. 72 92 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0331 Sto-Chr10 2650513 2651112 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0331 68 178 C2H2 Transcription Factor Family AT1G66140 35.766 2.20e-18 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0331 - - ahf:112779836 177.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0331 10 2650513 2651112 Sto10g0331 10 2650513 2651112 ECH