Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0310 ATGAGGTTGAAGATAGCAAAAGGAATTGCACGAGGCTTAGCTTTCATCCACGACAAGAAACATGTTCATGCCAACATTAAACCCACCAACATCCTATTAACCTCCGAAATGGAACCCATAATCACCGATTTCGGGCTCGACCGCCTCAGACCAACCGGTTCATCATCAGCTGCCCAACCGGACTTCTCAGTGGGTTCATCAAGTGGGGCCCACCAATTATTGCCCTATCAAGCACCGGAGTCTCTTCAACAACCACAAGGCCTCCAACCCAACCCCAAGTGGGACGTGTACTCATTTGGGATTGTCTTGCTGGAGCTTTTGAGCGGGAGGGTTTTCTCGGACCGGGAGATGGACCGGTGGTGGGAAAGTGGTTCAGTGGAAGAGGATAAAAACCGGGTTCTGAGGATGGCTGACGTGGGCATCAAGGGTGAGCCCACCGTGCTTGTGGCGGAGAAGCTCGGTGAAGCAGGGATCAAGCTGTTGAAGGACTATGCTGATGTGGATTGCTCCTATAATCTGAGCCCTGAGGAGCTGTGTAGCAAGATCTCGCAGTGCGATGCGTTGATTGTGCGTAGCGGGACGAAGGTGTCGCGCGAGGTGTTCGAATCGTGCGGTGGGAGGCTGAGGGTGGTTGGTAGGGCTGGGGTTGGGATTGATAATGTGGATCTTGCGGCGGCTACGGAGTATGGGTGCTTGGTGGTGAACGCGCCCACGGCTAATACGGTTGCGGCGGCCGAGCATGGGATTGCGCTCTTGGCTGCCATGGCTAGGAATGTTGCTCAAGCCGATGCCTCCGTGAAAGCCGGTAAATGGGAACGAAGTAAGTATGTGGGAGCATCCCTTGTGGGAAAAACACTTGCTGTGATGGGATTTGGGAAGGTTGGTTCTGAAGTTGCTCGTCGTGCCAAGGGACTTGACCGTGCACGTGCAATTGGTGTGGAGCTTGTGAGCTTTGATGAAGCCATAGCCACTGCAGATTTCATTTCCTTGCACATGCCTCTCACTCCTGCTACATCTAAGGTTCTCAATGATGAGACTTTTGCTAAGATGAAAAAGGGAGTCCGAATTGTCAATGTTGCTCGTGGAGGAGTCATTGATGAGGAAGCTCTAGTCAGGGCTCTAGATGCTGGCATTGTAGCTCAGgCGGCACTTGATGTTTTCACAGATGAGCCACCCCCAAAGGACAGCAAGTTAATTTTGCATGAGAATGTTACTGCAACACCTCATCTTGGTGCTAGTACCATGGAAGCTCAGGAAGGTGTGGCTATTGAAATAGCAGAAGCTGTTGTTGGTGCATTGAAAGGGGAGCTATCTGCTACTGCAGTTAATGCCCCAATGGTTCCTGCAGAGGTGTTAACAGAGCTGAAACCATTTGTTGATCTTGCTGAGAAACTCGGGAGATTTGCTGTGCAATTGGTAGCAGGAGGAAGTGGTGTAAAAACAGTAAAAGTGACTTATGCTTCTGCTAGAGCTCCAGATGATCTCGACACTCGGCTTCTCCGAGCCATGATAACCAAGGGTCTCATTGAGCCCATATCCAGTGTATTTGTGAATTTGGTGAATGCTGATTTCACTGCTAAACAAAGAGGGCTCAGGATAACAGAGGAGAGAATTGTTCTTGATGGCTCACCTGAGAATCCACTTGAATTCATCCAGGTCCAGATTGCTAATGTGGAATCCAGATTTGCTAGTGCCATATCGGATTCGGGCGAAATCAAGGTCGAGGGTTGTGTAAAAGATGGGAGCCCTCATCTGAGAAAGGTAGGATCTTTTGAAGTTGATGTGAGCTTGGAAGGTAGCATTATACTTTGCAGGCAGGTGGATCAGCCAggtatgattggaaaggttgGGAGCATTCTGGGTCAAGAGAATGTGAATGTGAGCTTCATGAGTGTTGGAAGGATTGCTCCACGCAAGCAAGCTGTAATGGCAATTGGTGTGGATGATAGACCTAAGAAAGAGACTTTGAAGAAGATTGGAGATATTCCTGCTGTTGAAGAGCTTGTTTTCCTCAAGTTGTAA 2022 0.4896 MRLKIAKGIARGLAFIHDKKHVHANIKPTNILLTSEMEPIITDFGLDRLRPTGSSSAAQPDFSVGSSSGAHQLLPYQAPESLQQPQGLQPNPKWDVYSFGIVLLELLSGRVFSDREMDRWWESGSVEEDKNRVLRMADVGIKGEPTVLVAEKLGEAGIKLLKDYADVDCSYNLSPEELCSKISQCDALIVRSGTKVSREVFESCGGRLRVVGRAGVGIDNVDLAAATEYGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWERSKYVGASLVGKTLAVMGFGKVGSEVARRAKGLDRARAIGVELVSFDEAIATADFISLHMPLTPATSKVLNDETFAKMKKGVRIVNVARGGVIDEEALVRALDAGIVAQAALDVFTDEPPPKDSKLILHENVTATPHLGASTMEAQEGVAIEIAEAVVGALKGELSATAVNAPMVPAEVLTELKPFVDLAEKLGRFAVQLVAGGSGVKTVKVTYASARAPDDLDTRLLRAMITKGLIEPISSVFVNLVNADFTAKQRGLRITEERIVLDGSPENPLEFIQVQIANVESRFASAISDSGEIKVEGCVKDGSPHLRKVGSFEVDVSLEGSIILCRQVDQPGMIGKVGSILGQENVNVSFMSVGRIAPRKQAVMAIGVDDRPKKETLKKIGDIPAVEELVFLKL 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0310 673 ProSiteProfiles ACT domain profile. 601 673 IPR002912 -
Sto10g0310 673 PANTHER FORMATE DEHYDROGENASE 1 135 668 - -
Sto10g0310 673 TIGRFAM PGDH: phosphoglycerate dehydrogenase 147 672 IPR006236 GO:0004617|GO:0006564
Sto10g0310 673 Gene3D - 149 436 - -
Sto10g0310 673 SUPERFAMILY ACT-like 591 670 IPR045865 -
Sto10g0310 673 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 145 277 - -
Sto10g0310 673 Pfam D-3-phosphoglycerate dehydrogenase intervening domain 454 557 IPR045626 -
Sto10g0310 673 Gene3D - 600 673 - -
Sto10g0310 673 Gene3D Transferase(Phosphotransferase) domain 1 1 148 - -
Sto10g0310 673 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 350 366 IPR029753 -
Sto10g0310 673 PANTHER D-3-PHOSPHOGLYCERATE DEHYDROGENASE 135 668 - -
Sto10g0310 673 Pfam Protein kinase domain 4 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g0310 673 CDD ACT_3PGDH-xct 602 673 - -
Sto10g0310 673 Gene3D - 448 599 IPR029009 -
Sto10g0310 673 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 147 443 IPR006139 GO:0016616|GO:0051287
Sto10g0310 673 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 321 343 IPR029753 -
Sto10g0310 673 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 249 411 IPR006140 GO:0051287
Sto10g0310 673 Gene3D - 240 409 - -
Sto10g0310 673 ProSiteProfiles Protein kinase domain profile. 1 189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g0310 673 SUPERFAMILY Serine metabolism enzymes domain 449 595 IPR029009 -
Sto10g0310 673 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 243 412 IPR036291 -
Sto10g0310 673 Pfam ACT domain 601 663 IPR002912 -
Sto10g0310 673 SUPERFAMILY Protein kinase-like (PK-like) 2 115 IPR011009 -
Sto10g0310 673 CDD PGDH_4 147 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0310 Sto-Chr10 2453929 2463012 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0310 2 144 Receptor kinase-like Gene Family AT4G37250 47.879 1.02e-32 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sto10g0310 2-Hacid_dh 6.5e-36 CL0325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0310 K00058 - gmx:100819264 907.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0310 10 2453929 2463012 Sto10g0310 10 2453929 2463012 ECH