Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0304 ATGGATTCAGTGTCTGCTGATACTTCTAGTGTACCTTCTAGTAAAGGTCCCTCTACTTCTCCTCCTGTTAAAGATGCCGAAGGACAAGCTTCTACAGTCTCTGGGCAAGGTAATTCTGCTGATGAGACATCACCTAGGTCTCCCACTGGCATATCAACTTGGGCCAAGAGTTTGAAAATTCCGCAGCCATTTTCTGGCTCTCAGGATGACTCACCAACTGAAAATTCTGGAAAATCAACCTTTGCACGATTTACTAGTAATTTAGCAATGCGGTTGTCTCCAAAACCATCTTCATCAGATGACAGTTCCAATGAACCTGCTGCTCAATCTAATTTGATTGAAAGTTTCGCAAAAGGCCTGGTTGACTCTTCTAGGAATGCTGTAAAAGCTGTTCAGGTCAAGGCCCGACATGTTGTATCTCAGAATAAACGTAGATACCAGGAGGGAGGATTTGATCTTGATATGACATACATCACGGAAAACATTATTGCCATGGGATTCCCTGCTGGCGACATAAGCTCTGGGTTTTTTGGCTACGTAGAAGGGCTTTACAGAAATCATATGGAAGAAGTGATTAAGTTTTTTGAGACTCATCATAAGgGCAAATACAAAGTATACAACCTTTGTTCTGAGCGGCTATATGATGCTTCATTATTTGAAGGGAAGGTGGCTAGTTTCCCATTTGATGACCATAATTGCCCACCGATGCAACTGATTATATCATTTTGTCAAAGTGCTTACTCATGGTTGAAACAAGACATTGAGAATGTTGTGGTTGTCCACTGTAAAGCTGGAATGGCAAGGACGGGGTTGATGATTTCTAGTCTTCTATTATTCTTAAAGTTCTTCCCAACTGCTGAGGAGTCCATTGATTATTACAATCAGAAAAGGTGTTTTGATGGAAAAGGACTTGTTCTGCCTAGTCAGATTAGGTATGTCAAATATTTTGAACGTGTGTTGACTTACTTCAATGGAGAAAATCCTCCTGCTCGCAGGTGCATGCTCAGGGGATTCCGGCTCCACAGGTGCCCTTACTGGATCAGGCCTGCAATAACTGTCTCAGATCATAGTGGTGTTTTGTTCTCAACCAAAAGGCATCCAAGAACCAAGGATCTTAATCCAGAAGATTATTGGTTTAGCGCACCCAAGAAGGGAGTGATGGTCTTTGCGCTGCCTGGGGAGCCAGGTCTTACAGAGTTGGCTGGGGACTTCAAAATTCATTTTCATGATCGCCAGGGAGATTTTTATTGTTGGTTGAACACAACTATGACAGAAAACAGGAAAATATTGAACACTAACGATCTTGATGGTTTTGACAAGAGAAAATTGCCTTCGCCAGGATTCTTGGTTGAGGTTGTGCTAGTGGATTATAATGGCAATGTCACAACAGCCCAAGCCGAAACTGTTACCAAAAAATCCGATGAGAGGTCAAGTACTAGTACTGTCCCAGTTGATGCAAGCACAACAACTCCAAATTCAGAGAAAGAGTCAGGGAATCAAGATAAAGAAGACGATGTGTTTTCAGATGGCGAGGGAGAGGATTCTGGTTCGACAAGAAGCAGGCAAGCAAAAGCAGCATCGGAAGGAGTTAGTAATTCTTCCACTGGATCTGAATCCCAAACTTCGAATCGGATGACCAATTTAACCCAGGCAACAGAAAAGATTTCTTTGGGAAATGCAAATGCTACACCAATGGATAATGCTAACAAGCCAAAAAGTGATGAAGGAAGAACAGTGTCCAGTCTTGAGGGTGGCAGCACAGAAAGTGAGTTTAAGGCAATGGCTGCAGATGCTTCTGTTTTTACGTTTGGAGATGATGAAGACTACGAAAGTGAGTGA 1839 0.4247 MDSVSADTSSVPSSKGPSTSPPVKDAEGQASTVSGQGNSADETSPRSPTGISTWAKSLKIPQPFSGSQDDSPTENSGKSTFARFTSNLAMRLSPKPSSSDDSSNEPAAQSNLIESFAKGLVDSSRNAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDISSGFFGYVEGLYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDASLFEGKVASFPFDDHNCPPMQLIISFCQSAYSWLKQDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESIDYYNQKRCFDGKGLVLPSQIRYVKYFERVLTYFNGENPPARRCMLRGFRLHRCPYWIRPAITVSDHSGVLFSTKRHPRTKDLNPEDYWFSAPKKGVMVFALPGEPGLTELAGDFKIHFHDRQGDFYCWLNTTMTENRKILNTNDLDGFDKRKLPSPGFLVEVVLVDYNGNVTTAQAETVTKKSDERSSTSTVPVDASTTTPNSEKESGNQDKEDDVFSDGEGEDSGSTRSRQAKAASEGVSNSSTGSESQTSNRMTNLTQATEKISLGNANATPMDNANKPKSDEGRTVSSLEGGSTESEFKAMAADASVFTFGDDEDYESE 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0304 612 ProSiteProfiles C2 tensin-type domain profile. 330 457 IPR014020 -
Sto10g0304 612 Gene3D Protein tyrosine phosphatase superfamily 129 326 IPR029021 -
Sto10g0304 612 MobiDBLite consensus disorder prediction 519 568 - -
Sto10g0304 612 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 29 612 - -
Sto10g0304 612 ProSitePatterns Tyrosine specific protein phosphatases active site. 260 270 IPR016130 GO:0016311|GO:0016791
Sto10g0304 612 SMART PTEN_C2_2 328 456 IPR014020 -
Sto10g0304 612 PANTHER PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2A 29 612 - -
Sto10g0304 612 MobiDBLite consensus disorder prediction 475 495 - -
Sto10g0304 612 ProSiteProfiles Phosphatase tensin-type domain profile. 144 323 IPR029023 -
Sto10g0304 612 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 237 297 IPR000387 GO:0016311|GO:0016791
Sto10g0304 612 MobiDBLite consensus disorder prediction 1 108 - -
Sto10g0304 612 CDD PTP_PTEN 154 318 IPR045101 GO:0016791
Sto10g0304 612 MobiDBLite consensus disorder prediction 466 612 - -
Sto10g0304 612 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 157 325 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0304 Sto-Chr10 2406346 2410800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0304 44 612 Protein tyrosine phosphatase (PTP) family AT3G19420 68.729 0.0 834
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0304 K01110 - gmx:100784003 958.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0304 10 2406346 2410800 Sto10g0304 10 2406346 2410800 ECH