Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0301 ATGGCCACCGACATCTCTTTCTGTGTCGTTTCATTCCTATTAtcgtctttcttcttccttcattcCTATTCCCAAGAATCTCAACCCCTTCCTTCCTCCGAAAGAGAAGCTTTAGAAATCATCATAGGAGGAGGAACATCTGACTACGCCCCAGCTCCTTCCCCTTCCGAATATGACAACCCTCCCGCCGATTGCCCCCCTCCGCCGCCGCCACCGTGCCCCCCTCCGCCTCCGCCGCCGACGCCGACGACCCGCCTGGACAGAGCTCGCATAGTGCTTCTGAAATTCGCCACCACCGTTGACGACCCCAAAGGCTTCACTCGCAATTGGAAGGGTCCGAACCCTTGTACCTACAATGGCGTTAAATGTGACAACTATCCAAATTCGAATGAGAGAGCAGTTTCGGGATTGGACTTCAATCCTGCGGCTTTCTCTGGCCGTAATGGTTCGAGCTTGTCTCTCTCGGGAATCTTGGGAATTCCAGAATTGACCTTCTTCCATGCGAACTCCAACAATTTCACAGGTCTCATCCCTTCCCAAATCACCAAGTACGATTACTTCTTCGAGCTCGACCTCAGCAACAACAAGCTTCAGGCTGATTTCCCCATGGAAATCCTCTCTGCTAAGAAACTAGTATTCCTAGATCTCAGGTTCAATCGCTTCACAGGTCCACTCCCTTCACAACTCTTCGAAATGGATCTCGATATCATCTTCGTTAACAACAACTTGTTCTGCCAGAGTCTACCTTCGAACTTTGGGTCCACACCGGCCAGGTTTCTCACATTCGCAAACAATAAATTCACGGGTCCCATCCCTTGTAGCATCGGACAAGCGTCGAAGACGCTCACGGAAGTGCTTTTTCTCGGAAACCAATTTTCTGGGTGTTTGCCTTATGAAATTGGGTTCCTCCAGAAAGCCACGGTGTTCGATGTGAGTGATAACTCATTGACGGGTCCAATCCCACAATCATTCGCTTGCTTAGGGAATATTCGGTTCTTGAATTTAGCTAACAACAAGTTCTACGGCTCTGTTCCTGAATCTGTGTGCGACCTTCCCGGTATTCGCAGCGATGGGAATTTGTCGTTGTCGGGGAATTACTTCACGGAAGTGGGACCTAAATGTAAGAAGCTGATCAAGTCTAGGGTGCTTGACGTGAGCAAGAATTGTATTCCGTGGCTTCCGAACCAGAGGTCGAAGGAAGAATGCGGGGCTTTCTTGTCTTGTGTGAAGCCGTGTGCGAATGCCAAGTCTCTCAATTATGTTCCTTGCCAGAGGAAGTGGAGTTCGATGGCGGAGAAGACGGTGTCGCCGCCTCCTACGCCGGTGACTTACGAGTCTCTGAATCCGAATCCAAGACCCCATCGGTTGCTGTTGTGA 1377 0.4946 MATDISFCVVSFLLSSFFFLHSYSQESQPLPSSEREALEIIIGGGTSDYAPAPSPSEYDNPPADCPPPPPPPCPPPPPPPTPTTRLDRARIVLLKFATTVDDPKGFTRNWKGPNPCTYNGVKCDNYPNSNERAVSGLDFNPAAFSGRNGSSLSLSGILGIPELTFFHANSNNFTGLIPSQITKYDYFFELDLSNNKLQADFPMEILSAKKLVFLDLRFNRFTGPLPSQLFEMDLDIIFVNNNLFCQSLPSNFGSTPARFLTFANNKFTGPIPCSIGQASKTLTEVLFLGNQFSGCLPYEIGFLQKATVFDVSDNSLTGPIPQSFACLGNIRFLNLANNKFYGSVPESVCDLPGIRSDGNLSLSGNYFTEVGPKCKKLIKSRVLDVSKNCIPWLPNQRSKEECGAFLSCVKPCANAKSLNYVPCQRKWSSMAEKTVSPPPTPVTYESLNPNPRPHRLLL 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0301 458 MobiDBLite consensus disorder prediction 55 84 - -
Sto10g0301 458 MobiDBLite consensus disorder prediction 432 458 - -
Sto10g0301 458 SUPERFAMILY L domain-like 89 390 - -
Sto10g0301 458 Gene3D Ribonuclease Inhibitor 258 424 IPR032675 -
Sto10g0301 458 Pfam Leucine rich repeat N-terminal domain 90 124 IPR013210 -
Sto10g0301 458 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 15 436 - -
Sto10g0301 458 Gene3D Ribonuclease Inhibitor 87 257 IPR032675 -
Sto10g0301 458 PANTHER BNAC05G26270D PROTEIN 15 436 - -
Sto10g0301 458 MobiDBLite consensus disorder prediction 41 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0301 Sto-Chr10 2396591 2397967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0301 85 407 Leucine-rich Repeat extension Gene Families AT3G24480 41.538 3.02e-75 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0301 - - cam:101512430 479.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0301 10 2396591 2397967 Sto10g0301 10 2396591 2397967 ECH