Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0300 ATGGATCAAAAACACAATCAGTTGTTATTAGCTTATTATTACCACACAGCAACAACATTCTTCATGATCATCATATTATCTTTTCTCTTCGTCTTCATCCCCACCTTAAACTCAACAATAATCATCCCTCAACCTGATCCATTAATCCCAGAAATCCTAAACTTCCTAGACCAGAGACTCGCTCTCGTCTACCCCATCATCCAAACCTTCAAGAACACCATAACCTCCGACCCATTTGGTGTCACCCAAACCTGGGTTGGCCCCAACATTTGCAACTACACCGGCTTCTACTGCGACAACCCACCCGACAACCTCACCGCCCTCACCGTCGCCTCCATCGACCTCAACGGCTTCCGCCTCGCCGCCCCTAGCCTCGACGGCTTCATCGACGGCTTCCCGGACTTGGCACTCTTCCATGCCAACACTAACAGCTTCTCAGGGCCCATATCGGCTGGGATAGCGAAGCTTCAGTACTTATATGAGCTGGATGTGAGTAATAATATGCTGTCCGGGACGTTCCCTGCTGAGGCTGTTCTGAACTCGCGGTCGTTGACTTTCTTGGACATAAGGTTCAACTTGTTCTATGGAAGTGTTCCGCCGGGGATCTTCGTGAAGAGGCTTGATGTTCTTTTCATCAATGATAATGATTTCGTGCAGAGACTTCCGGAGAATCTGGGAGAGACGTCGGTGTATTATTTGACTTTGGCTAATAATAACTTCACCGGACCCATCCCCAGAAGCATTGGGAAAGCCTCCGAGACGTTGATGGAAGTCTTGTTCTTGAATAACCACTTAACAGGTTGTGTTCCTTATGAAATCGGATTTCTAACAAAATTGACGGTGTTGGATGCTGGAAACAACCAGCTGACTGGAGGCGGCGGAGATACTCAACTTCGCCGGAAACCTTCTGTACGGACAGGTGCCGGAGGTGGTGTGTGCATTGGGGAATATAGTGAACCTGTCCTTATCGGATAA 975 0.4831 MDQKHNQLLLAYYYHTATTFFMIIILSFLFVFIPTLNSTIIIPQPDPLIPEILNFLDQRLALVYPIIQTFKNTITSDPFGVTQTWVGPNICNYTGFYCDNPPDNLTALTVASIDLNGFRLAAPSLDGFIDGFPDLALFHANTNSFSGPISAGIAKLQYLYELDVSNNMLSGTFPAEAVLNSRSLTFLDIRFNLFYGSVPPGIFVKRLDVLFINDNDFVQRLPENLGETSVYYLTLANNNFTGPIPRSIGKASETLMEVLFLNNHLTGCVPYEIGFLTKLTVLDAGNNQLTGGGGDTQLRRKPSVRTGAGGGVCIGEYSEPVLIG 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0300 324 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 16 291 - -
Sto10g0300 324 PANTHER SCOPOLETIN GLUCOSYLTRANSFERASE 16 291 - -
Sto10g0300 324 Gene3D Ribonuclease Inhibitor 91 298 IPR032675 -
Sto10g0300 324 SUPERFAMILY L domain-like 71 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0300 Sto-Chr10 2389119 2391662 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0300 20 296 Leucine-rich Repeat extension Gene Families AT3G22800 44.599 7.02e-62 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0300 - - gmx:100813314 374.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0300 10 2389119 2391662 Sto10g0300 10 2389119 2391662 ECH