Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0273 ATGGAGCAAGCACAGACGCAACAGCTCGAGCAGGTTCAGTGCTTCGGCCGCAAGAAGACCGCCGTAGCCGTCACCTACTGCAAGCGTGGCCGTGGTCTCATCAAGATCAATGGCTGCCCAATCGAACTCGTCGAGCCGGAGATCCTCCGATTCAAGGCATTCGAGCCCATCCTCCTCCTCGGGAAGCACCGATTTGCCGGCGTCGACATGCGTATCCGTGTCAAGGGTGGTGGTCACACCTCGCAGATATACGCGATTCGTCAGAGCATAGCCAAGGCCCTCGTTGCCTTTTACCAGAAGTACGTGGATGAGCAGAGCAAGAAGGAGATCAAGGACATCCTCGTCAGGTACGACCGAACCCTGCTTGTTGCTGATCCAAGGCGCTGCGAGCCCAAGAAGTTCGGTGGTCGTGGTGCTCGCGCAAGGTTCCAGAAGTCCTACCGTTGA 447 0.5749 MEQAQTQQLEQVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGKHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0273 148 ProSitePatterns Ribosomal protein S9 signature. 76 94 IPR020574 GO:0003735|GO:0005840|GO:0006412
Sto10g0273 148 Gene3D - 2 148 IPR014721 -
Sto10g0273 148 PANTHER - 6 148 - -
Sto10g0273 148 SUPERFAMILY Ribosomal protein S5 domain 2-like 11 148 IPR020568 -
Sto10g0273 148 Pfam Ribosomal protein S9/S16 16 148 IPR000754 GO:0003735|GO:0005840|GO:0006412
Sto10g0273 148 PANTHER RIBOSOMAL PROTEIN S9 6 148 IPR000754 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0273 Sto-Chr10 2205179 2205625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0273 10 148 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 90.647 3.33e-93 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0273 K02960 - gmx:100527911 279.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0273 10 2205179 2205625 Sto10g0273 10 2205179 2205625 ECH