Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0272 ATGGCGACCAATGGAGATCAGAAGCAAAGTGAAGCAGGAAGGCACCAAGAGGTTGGACACAAGAGTCTCTTGCAGAGTGATGCTCTGTATCAGTACATACTCGAAACCAGTGTTTACCCAAGAGAACCAGAATCCATGAAGGAACTCAGAGAGCTCACAGCCAAGCACCCATGGAACATCATGACAACCTCAGCAGATGAAGGACAATTCTTGAACATGCTTGTGAAGCTTATAAACGCCAAGAACACCATGGAAATTGGTGTCTACACTGGCTACTCCTTGCTCGCTACTGCACTTGCTCTTCCTCAAGATGGAAAGATATTGGCAATGGACATTAATAGGGAAAACTACGAACTGGGAAGGCCAATAATTGAGAAAGCAGGTGTTGCTCACAAAATTGATTTCAAAGAAGGACCTGCTCTTCCTGTTCTTGATGAACTCATCAAGGATGAGAAGAATCATGGGAGCTACGACTTTATATTTGTGGACGCAGACAAAGACAATTACCTAAACTACCACAAAAGACTTATTGACCTAATCAAGGTGGGGGGTTTGATCGGCTACGACAACACCCTATGGAACGGCTCTGTCGTGGCACCACCTGATGCGCCACTCAGGAAATACGTCATGTACTACAGAGACTTCGTATTGGAGCTCAATAAGGCTCTCGCTCTCGACCCTAGGATCGAAATCTGCATGCTTCCTGTTGGTGATGGAATCACTCTCTGCCGTCGGATTAAGTGA 744 0.4583 MATNGDQKQSEAGRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELRELTAKHPWNIMTTSADEGQFLNMLVKLINAKNTMEIGVYTGYSLLATALALPQDGKILAMDINRENYELGRPIIEKAGVAHKIDFKEGPALPVLDELIKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLIKVGGLIGYDNTLWNGSVVAPPDAPLRKYVMYYRDFVLELNKALALDPRIEICMLPVGDGITLCRRIK 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0272 247 Gene3D Vaccinia Virus protein VP39 21 247 IPR029063 -
Sto10g0272 247 PANTHER O-METHYLTRANSFERASE-RELATED 1 247 - -
Sto10g0272 247 Pfam O-methyltransferase 35 246 IPR002935 GO:0008171
Sto10g0272 247 CDD AdoMet_MTases 85 186 - -
Sto10g0272 247 PANTHER CAFFEOYL-COA O-METHYLTRANSFERASE 1 1 247 - -
Sto10g0272 247 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 26 245 IPR029063 -
Sto10g0272 247 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 22 246 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0272 Sto-Chr10 2198424 2201187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0272 6 246 Monolignol Biosynthesis Gene Families AT4G34050 90.456 7.34e-170 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0272 K00588 - jre:108988942 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0272 10 2198424 2201187 Sto10g0272 10 2198424 2201187 ECH
Sto2g0585 2 4946527 4950032 Sto10g0272 10 2198424 2201187 ECH