Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0262 TTGGCTACCCTAAATAAATCTACATCAATGGTGTCTTCAGACCCCTCAGAACAGAAGGGAAAAGATATGACTGAATCAAGTAACTTGCTTCAATGTCCTTTAAACCAGCAACTCTCTAACTGTTCAGATGGCCCGGTAGCTATCCTTTGGGATATTGAAAATTGTCCTGTTCCAAGTGATGTTCGCCCCGAAGATGTTGCTGGTAATATAAGAATGGCTTTGCAGGTGCATCCAATAATTAAAGGAGCTGTTGTGATGTTTTCTGCTTATGGGGATTTCAATGCCTTCCCTAGGCGAGTCAGAGAAGGCTGCCAAAGAACTGGTGTTAAACTTATTGATGTTCCCAATGGGAGAAAGGATGCTGCTGACAAAGCAATCTTGATTGACATGTTCTTGTTTGCCCTTGACAACCGCCCACCTTCTTCTATCATGCTGATATCTGGAGATGTTGATTTTGCTCCTGCACTTCACATTCTTGGTCAACGGGGATATACCATCATTCTTGTTATCCCTGCCGGGGCAGGTGTTTCATCTGCGCTTAGCAATGCTGGAAAATTTGTGTGGGACTGGCCTAGCATTGCTCGTGGAGAAGGTTTTGTGCCCCCCATAAAGGTTCTGGTGCCACCTCGTGTGGGTCCAACTGAGGATGCTGGATATCTGATAGGGTGCCATATAAATGACAACCTTGATGgacaaaatgaagaagaagctaTTGTTTATAGAGGGATCTCAGAGAACTATCATAACTCTTGGGGCACCTCATTTGTGTCTCATTCTCTGTCTGAATACAACAGCAGTACAATGAATGTGTCTTGCTTTCCTACAGCTTTAAGGTCACATAGCCTTCCATCCACGTTGGATAATGTTTCACGAGGACCTATGCCTTCTTCTAGAGACCAAAACGAATACCCATTGTGGGTACAGCCAGGGGATTTGAATGGTCTCAAGGTTCAGCTAGTAAGGTTGCTTGAACTTTCAGGAGGATGCCTGCCTCTGACCCGAGTTCCAGCAGAGTATCAGAAATATTTTGGGAGGCCTCTTTTTGTATCTGAATATGGGGCATGCAAACTAGTAAATCTTTTCAAGAAGATGGGAGACACATTGGCTGTTGAGGGCAAAGGGCATAGAAAATTTGTATATCTCCGAAACTTTAAGGTAAACCCAAGTGCACCTCCTTTGTCTCAGGCAAAAAGAGATAAGAAGGGAAAGGGGGGTCAGGAAGAGAATGTGGATATTGTCACTGCTGGTTGCTCTTCAGATGAATTCTCAGATGAAGAAAGAGTAGTCATGGAAGAACATGATGAGAGAACCAACATAGGTAAGGGTCACCAGGGGAAAGCAGCCAGATGTTACATTGATGACGGTATTCTGGAGCAGTTCAAGCATGAGCTGCAAGAGATTCTAGTAAGCTATTCTTGTCGAATATTCTTAGGTTGTTTCGAGGCCATTTACCAGCAACGATACAAGAAACCACTTGAATACCAGAGATTTGGTGTGAACAAGTTAGAAGATTTGTTTGAGAAAGTGAGTGATGTAGTACTATTGCACGAAGAACCAGTAAGCAAGAAGAAGTTCTTGGCTGCCGTGGTTTGTTAG 1596 0.4317 LATLNKSTSMVSSDPSEQKGKDMTESSNLLQCPLNQQLSNCSDGPVAILWDIENCPVPSDVRPEDVAGNIRMALQVHPIIKGAVVMFSAYGDFNAFPRRVREGCQRTGVKLIDVPNGRKDAADKAILIDMFLFALDNRPPSSIMLISGDVDFAPALHILGQRGYTIILVIPAGAGVSSALSNAGKFVWDWPSIARGEGFVPPIKVLVPPRVGPTEDAGYLIGCHINDNLDGQNEEEAIVYRGISENYHNSWGTSFVSHSLSEYNSSTMNVSCFPTALRSHSLPSTLDNVSRGPMPSSRDQNEYPLWVQPGDLNGLKVQLVRLLELSGGCLPLTRVPAEYQKYFGRPLFVSEYGACKLVNLFKKMGDTLAVEGKGHRKFVYLRNFKVNPSAPPLSQAKRDKKGKGGQEENVDIVTAGCSSDEFSDEERVVMEEHDERTNIGKGHQGKAARCYIDDGILEQFKHELQEILVSYSCRIFLGCFEAIYQQRYKKPLEYQRFGVNKLEDLFEKVSDVVLLHEEPVSKKKFLAAVVC 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0262 531 CDD LOTUS 312 381 - -
Sto10g0262 531 MobiDBLite consensus disorder prediction 1 25 - -
Sto10g0262 531 CDD PIN_limkain_b1_N_like 45 171 - -
Sto10g0262 531 Gene3D - 453 524 IPR041966 -
Sto10g0262 531 Gene3D - 311 380 IPR041966 -
Sto10g0262 531 PANTHER LIMKAIN B LKAP 2 527 IPR024768 GO:0005777|GO:0010468|GO:1903231
Sto10g0262 531 ProSiteProfiles OST-type HTH domain profile. 311 383 IPR025605 -
Sto10g0262 531 Pfam NYN domain 45 185 IPR021139 GO:0004540
Sto10g0262 531 CDD LOTUS 457 519 - -
Sto10g0262 531 Gene3D - 42 191 - -
Sto10g0262 531 PANTHER ZINC FINGER, CCHC-TYPE, MEIOSIS ARREST FEMALE PROTEIN 1, PIN DOMAIN-LIKE PROTEIN-RELATED 2 527 - -
Sto10g0262 531 Pfam OST-HTH/LOTUS domain 313 379 IPR025605 -
Sto10g0262 531 Pfam OST-HTH/LOTUS domain 456 519 IPR025605 -
Sto10g0262 531 ProSiteProfiles OST-type HTH domain profile. 456 530 IPR025605 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0262 46 196 C2H2 Transcription Factor Family AT5G61190 42.384 1.15e-27 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0262 - - gmx:100818186 869.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0262 10 2118988 2120583 Sto10g0262 10 2118988 2120583 ECH