Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0215 ATGACTTTTATTATACCACATTCAAACCAGGCCTTGAGCTGCCTCATCTTTTGCTCCATCCTTATCTCTTCACTTTCAACCCCACTCCCACCAACTTTGGAAGGCAGTGATCttccaccaaattttcaatatgAGGTTGATCAAAACTTAATTTTTGCCAATCAAAGGCTCAAAAATGCTTATGTTGCTCTTCAGGCATGGAAATCTGCCATATACTCTGACCCTTTGAACACACTTGGCAATTGGGTGGGTGCTGATGTATGCTCCTACAACGGTGTATTTTGTGCTCCTGCACTTGATCATCCTAAATTGACCGTTGTTGCTGGCATTGATCTTAATCATGCAGACATTGCTGGGCACCTTGTACCAGAGTTAGGTCTCCTCACAGACCTAGCCCTTTTCCATATTAACTCTAATAGGTTTTGTGGAATTGTCCCAAAGAGCTTGAAAAGTTTCACTCTTATGCATGAGTTTGATATTAGTAACAATCGCTTTGTTGGTAAGTTTCCTTCAGTGGTACTCACATGGCCAAATATTAAGTATTTGGACATCAGATTTAATGACTTTGAGGGATGTTTGCCTCCAGAGCTATTTGAGAAGGACCTTGATGCGTTGTTCTTGAACAACAATCGCTTTGTTTCTACTATCCCAGAAACTCTAGGCAAATCTAATGTCTCAATAGTGTCTTTTGCTAACAACAAATTCACAGGTTGTATTCCAAAAACAATTGGAAATATGGTGAACTTGAATGAAATTGTCCTTTTGGGTAATGGCCTTGGAGGTTGCTTCCCGCAAGAGATTGGGTTGCTAAGAAATGTGACAGTTTTTGATGCTAGTCATAATGGGTTTATAGGAACTTTGCCAAACTTTTCAGGTTTGAAAAGTGTGGAGGTGATAAATATTGCACATAATAAGATTGCTGGGTATGTGAGTGAAACTACTTGCAAGTTACCTATGTTAACAAACTTTACATTCTCGGACAATTACTTTAATGGGGTGGCTCAAGCTTGTTTGCCTTCTCCAAAGGTGAGAGTTGTTTTTAATGATGAAAACAATTGTTTAACAAAAAGACCCAATCAAAAGACTACCAAGCAATGCCTCCCAGTGGTGACTCATCATGTGGATTGTAGCAAGAGTTGTGGAGGTGGTAGCAACAACTATAACCCTTCAACACCAAAGCCAACTCCACATGTCCAATCTCCACCCCGAATAATTCACTCACCACCACCCCCAGTCCATTCTCCCCCTCCTCCAGTTTATTCACCACCACCTCCACCCCCAGTGCATTCTCCCCCTCCTCCAGTTTACTCACCACCACCCCCAGTACATTCTCCACCTCCTCCGGTTCATTCGCCACCACCCCCAGTACATTCTCCACCTCCTCCAGTTcattcaccaccaccaccagtcCATTCTCCACCACCACCAGTTCACTCACCACCACCGCCAGTACATTCCCCACCACCCCCGGTCCATTCCCCGCCTCCACCAGTTCACTCACCTCCACCCCCGGTCCATTCCCCACCACCTCCAGTTCACTCACCACCACCCCCAGTCCATTCCCCACCTCCACCAGTTCACTCACCCCCACCCCCGGTCCATTCCCCACCACCACCGGTTCACTCACCCCCACCCCCGGTCCATTCCCCACCACCACCCCCGGTCCATTACCCACCTCCACCGGTTCACTCACCACCACCCCCAGTTTATTCCCCACCCCCACCGGTTCACTCACCACCACCCCCGGTCCATTCTCCACCCCCACCGGTTCACTCACCACCACCCCCGGTCCATTCTCCACCTCCACCGGTTCACTCACCACCACCCCCGGTTCACTCACCCCCACCCCCGGTCCATTCCCCACCACCCCCAGTCCATTCTCCACCTCCACCGGTTCACTCACCACCACCTCCACCGGTTCACTCACCCCCTCCCCCAGTTCAATCTCCTCCTCCCCCAACATGGGATGATATCATCTTACCCCCAATCTTTGGGGCTCATTACAGTTCACCACCTCCACCATCAGTCATGGGATATTAA 2040 0.4765 MTFIIPHSNQALSCLIFCSILISSLSTPLPPTLEGSDLPPNFQYEVDQNLIFANQRLKNAYVALQAWKSAIYSDPLNTLGNWVGADVCSYNGVFCAPALDHPKLTVVAGIDLNHADIAGHLVPELGLLTDLALFHINSNRFCGIVPKSLKSFTLMHEFDISNNRFVGKFPSVVLTWPNIKYLDIRFNDFEGCLPPELFEKDLDALFLNNNRFVSTIPETLGKSNVSIVSFANNKFTGCIPKTIGNMVNLNEIVLLGNGLGGCFPQEIGLLRNVTVFDASHNGFIGTLPNFSGLKSVEVINIAHNKIAGYVSETTCKLPMLTNFTFSDNYFNGVAQACLPSPKVRVVFNDENNCLTKRPNQKTTKQCLPVVTHHVDCSKSCGGGSNNYNPSTPKPTPHVQSPPRIIHSPPPPVHSPPPPVYSPPPPPPVHSPPPPVYSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPPVHYPPPPVHSPPPPVYSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPPVHSPPPPVQSPPPPTWDDIILPPIFGAHYSSPPPPSVMGY 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0215 679 MobiDBLite consensus disorder prediction 378 393 - -
Sto10g0215 679 Pfam Leucine rich repeat N-terminal domain 61 95 IPR013210 -
Sto10g0215 679 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1 452 533 - -
Sto10g0215 679 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1 580 676 - -
Sto10g0215 679 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1 390 475 - -
Sto10g0215 679 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1 34 394 - -
Sto10g0215 679 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1 508 592 - -
Sto10g0215 679 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 452 533 - -
Sto10g0215 679 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 390 475 - -
Sto10g0215 679 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 508 592 - -
Sto10g0215 679 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 580 676 - -
Sto10g0215 679 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 34 394 - -
Sto10g0215 679 MobiDBLite consensus disorder prediction 394 658 - -
Sto10g0215 679 MobiDBLite consensus disorder prediction 378 679 - -
Sto10g0215 679 Gene3D Ribonuclease Inhibitor 59 360 IPR032675 -
Sto10g0215 679 SUPERFAMILY L domain-like 60 357 - -
Sto10g0215 679 PRINTS Proline rich extensin signature 384 396 - -
Sto10g0215 679 PRINTS Proline rich extensin signature 401 417 - -
Sto10g0215 679 PRINTS Proline rich extensin signature 422 434 - -
Sto10g0215 679 PRINTS Proline rich extensin signature 441 462 - -
Sto10g0215 679 PRINTS Proline rich extensin signature 467 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0215 Sto-Chr10 1810528 1812567 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0215 34 378 Trihelix Transcription Factor Family AT3G19020 68.208 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0215 - - gsj:114419228 555.058