Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0211 ATGGGTTCGGTTCCGCCAGAACTGAGCTTGAATTTGAGACCCACTTTCGTTCCCAAGACGATCAGTGATTTCCTCTACGAGGTTTCCATGATCGGAGACGCCCCAGATAAGTTGTCGAGGCTGGATGAGTTTCTCAGGAGATTGGAAGAGGAAATGAGGAAGATCGACGCGTTTAAGCGTGAGCTTCCTCTCTCCATGCTCCTCTTAAATGATGCTATCTTAACTCTGAAGGAGGAATCAGCAAAATTTAGAACACCTATTTCTCAGCCAGTGTTGGAAGAGTTTATTCCCTTGAAGAAAGAATGTGATCAGAAAGAGGAAggtaaaagagaaaaggaatgcAGAGATAATAAGAAGAATTGGATGAGTTCTGTTCAGCTCTGGAATACTAATAGTGCCCATGAGGAAAAACAACACTGTAATTTAGAAAACAAgCAGAAAAGCCAAGAGGAAGGACAATCGATGGCAGAGGATCCATTCCAATCTCGTAGACACAGAAATAATGGGTGCAGGGCGTTCTTGCCTTTTGCAACTTACTCTTCTATACATATGACAACAGTGTCAGcgaaggaagagaaggaagactCCATTAATGGGCTTTCTCTTCTGACCCCTGGTACTAAAACTTTGAGGGAAGGTTCTGGTTCAAGTGGATCGAGAAGCAGCTCTAGCAGAGCAGTTTCCTCCTCTACTCCCAGTGCACAACAGCCAACTATACCCTCAGGACATCAGCAGTCACAACAGCAGGCTGCCCGGAAACAGAGGAGGTGCTGGTCGCCGGAGTTACACCGGCGATTCGTCAATGCTCTACAGCAACTCGGAGGTTCTCAAGCGGCAACTCCGAAGCAAATTAGAGAACTGATGCAGGTTGATGGCCTGACCAATGATGAAGTGAAGAGTCATTTACAAAAGTACCGACTTCACACTCGAAGAGCCCCTGCTAACACGGGTGCACCTGCTACTAATCAATCTGTAGTAGTTCTTGGAGGTTTGTGGATGTCCCAAGATCAGTACAATGACTCATCAAAGGCTAGCAGTTCTGGCTCTGGTTCTCCTCAAGGCCCCCTCCAGTTAGCGGCATCCGGTGGAGGAACATCCCGAACTGAAGGTGACAGTatggaagatgatgaagatgaaaaatCAGAGAGCTTTAGCTGGAAAAGTCACATCCACAAATCTGGAAAAGATGATGTGTAG 1197 0.4411 MGSVPPELSLNLRPTFVPKTISDFLYEVSMIGDAPDKLSRLDEFLRRLEEEMRKIDAFKRELPLSMLLLNDAILTLKEESAKFRTPISQPVLEEFIPLKKECDQKEEGKREKECRDNKKNWMSSVQLWNTNSAHEEKQHCNLENKQKSQEEGQSMAEDPFQSRRHRNNGCRAFLPFATYSSIHMTTVSAKEEKEDSINGLSLLTPGTKTLREGSGSSGSRSSSSRAVSSSTPSAQQPTIPSGHQQSQQQAARKQRRCWSPELHRRFVNALQQLGGSQAATPKQIRELMQVDGLTNDEVKSHLQKYRLHTRRAPANTGAPATNQSVVVLGGLWMSQDQYNDSSKASSSGSGSPQGPLQLAASGGGTSRTEGDSMEDDEDEKSESFSWKSHIHKSGKDDV 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0211 398 MobiDBLite consensus disorder prediction 190 256 - -
Sto10g0211 398 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 250 310 IPR017930 -
Sto10g0211 398 Coils Coil 41 61 - -
Sto10g0211 398 MobiDBLite consensus disorder prediction 338 398 - -
Sto10g0211 398 MobiDBLite consensus disorder prediction 380 398 - -
Sto10g0211 398 PANTHER TRANSCRIPTION FACTOR HHO6 7 392 - -
Sto10g0211 398 MobiDBLite consensus disorder prediction 136 165 - -
Sto10g0211 398 MobiDBLite consensus disorder prediction 200 254 - -
Sto10g0211 398 MobiDBLite consensus disorder prediction 135 166 - -
Sto10g0211 398 SUPERFAMILY Homeodomain-like 251 311 IPR009057 -
Sto10g0211 398 MobiDBLite consensus disorder prediction 338 368 - -
Sto10g0211 398 Pfam Myb-like DNA-binding domain 255 306 IPR001005 -
Sto10g0211 398 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 7 392 IPR044787 GO:0003700|GO:0006355
Sto10g0211 398 Gene3D - 252 310 - -
Sto10g0211 398 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 253 308 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0211 Sto-Chr10 1773958 1775887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0211 40 333 G2-like Transcription Factor Family AT2G03500 40.196 2.45e-60 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sto10g0211 Myb_DNA-binding 6.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0211 - - vvi:100267475 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0211 10 1773958 1775887 Sto10g0211 10 1773958 1775887 ECH