Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0207 ATGGGAGTCTGTGTCTCCAAGCCGCCGAAGCCGAACCCATATGCCggccaCGATCCGCGTGAGTGTGATGACCCTTCGCGAATCCCCAAAACCCCTCTCTCTCCCATCACCAACAACTACCACAACCGGAAAGATGACGTCATTGCCGGGAAGCAGTCTCCGTTTTTCCCCTTCTACAGTCCTAGTCCGGCTCACTTCCTCAAGAAGTCTCCGGCGTCGACGGGAGGGAGCAAGAGTGCGAGTTCGACTCCGAGGAGGTTTTTCCGGCGGCCTTTTCCTCCGCCGTCTCCGGCCAAACACATAAAGGCTGTTCTAGCGAGGAggcaagggaagaagaaggcaGCGACGGCGATTCCTGAAGAAGGGGAGGAAGATGAATCGAGAGACGGCGAGGTGAATTTGGACAAGAGGTTTGGGTTTTCGAAGGAGTTTACCAGTAGGCTTGAGGTTGGGGACGAAGTAGGCAGAGGGCATTTTGGGTATACCTGCTCTGCTAGGTTCAAGAAAGGCGAGCTTAAGGGTCATCAAGTGGCTGTAAAGGTCATCCCTAAAGCTAAGATGACAACAGCAATTGCAATTGAAGATGTAAGAAGGGAGGTGAAAATATTAAGAGCTTTGAATGGACACAGCAATCTGGTACAATTCTATGATGCATTTGAAGACCAAGATAATGTCTACATTGTAATGGAGTTATGTGAAGGAGGTGAGCTTTTAGATAGGATACTTTCAAGAGGAGGGAAGTActcagaagaagaagcaaaagcagTCATGGTACAAATACTGAATGTTGTTGCGTTTTGTCATCTTCAAGGTGTGGTGCACCGAGATCTTAAGCCAGAGAATTTTTTGTATACTTCGAAGGATGAGAACTCTGAGTTGAAAGCTATAGACTTTGGGTTATCTGACTTTGTCAGACCAGATGAAAGGCTCAATGATATTGTTGGAAGTGCATATTATGTGGCCCCCGAAGTTCTACATAGATCTTATAGTACAGAAGCCGATGTATGGAGTATAGGCGTGATAGCATATATTCTTTTATGTGGTAGTCGTCCATTTTGGGCACGAACAGAGTCTGGCATTTTTAGGGCAGTTCTGAAAGCTGAACCAAGCTTTGATGAAATTCCTTGGCCTTCTTTATCCCCAGAAGCGAGAGATTTTGTCAAGCGCCTTTTAAATAAGGACCCACGGAAGCGAATATCAGCTGCTCAGGCTCTAAGTCATCCTTGGATACGAAATTACAATAATGTAAAAGTTCCTcttgatattttaatatttaagctCATGAAAGCTTATATGAGATCATCATCCTTGCGCAGGGCTGCCTTAAGGGCCTTATCAAAGACATTGACAGCCGATGAGCTCTATTATCTGAAGGAGCAATTTGCTTTGCTGGAGCCAAGCAAAAATGGCACTATAACATTAGATAACATCAGGATGGCGTTGATGAAATATGCAACAGATGCCATGAAAGAGTCCCGCATTTCTGATTTTATTGCCTCGCtaaattcattacaatataGAAGAATGGATTTTGAAGAATTTTGTGCAGCTGCATTAAGTGTGCATCAGCTTGAAGCGCTTGATCGTTGGGAACAGCATGCTCGCTGTGCATATGAACTTTTTGATAAAGATGGAAACAGGGCCATAGTCATTGAAGAACTTGCTTCAGAACTCGGACTTGGCCCTTCTATCCCCGTTCATGTCGTACTCATCGATTGGATAAGGCATACCGACGGGAAGCTAAGCTTTCTCGGGTTTGTGAAATTGTTACATGGTGTATCCAGCCGAACTCTTGCAAAGGTGCAATGA 1809 0.4339 MGVCVSKPPKPNPYAGHDPRECDDPSRIPKTPLSPITNNYHNRKDDVIAGKQSPFFPFYSPSPAHFLKKSPASTGGSKSASSTPRRFFRRPFPPPSPAKHIKAVLARRQGKKKAATAIPEEGEEDESRDGEVNLDKRFGFSKEFTSRLEVGDEVGRGHFGYTCSARFKKGELKGHQVAVKVIPKAKMTTAIAIEDVRREVKILRALNGHSNLVQFYDAFEDQDNVYIVMELCEGGELLDRILSRGGKYSEEEAKAVMVQILNVVAFCHLQGVVHRDLKPENFLYTSKDENSELKAIDFGLSDFVRPDERLNDIVGSAYYVAPEVLHRSYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKAEPSFDEIPWPSLSPEARDFVKRLLNKDPRKRISAAQALSHPWIRNYNNVKVPLDILIFKLMKAYMRSSSLRRAALRALSKTLTADELYYLKEQFALLEPSKNGTITLDNIRMALMKYATDAMKESRISDFIASLNSLQYRRMDFEEFCAAALSVHQLEALDRWEQHARCAYELFDKDGNRAIVIEELASELGLGPSIPVHVVLIDWIRHTDGKLSFLGFVKLLHGVSSRTLAKVQ 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0207 602 ProSitePatterns Protein kinases ATP-binding region signature. 154 180 IPR017441 GO:0005524
Sto10g0207 602 PANTHER SERINE/THREONINE-PROTEIN KINASE 41 596 - -
Sto10g0207 602 Gene3D Phosphorylase Kinase; domain 1 150 237 - -
Sto10g0207 602 MobiDBLite consensus disorder prediction 1 45 - -
Sto10g0207 602 Gene3D Transferase(Phosphotransferase) domain 1 238 430 - -
Sto10g0207 602 MobiDBLite consensus disorder prediction 66 130 - -
Sto10g0207 602 SMART serkin_6 148 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g0207 602 Pfam Protein kinase domain 150 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g0207 602 ProSiteProfiles Protein kinase domain profile. 148 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g0207 602 PANTHER CDPK-RELATED KINASE 2 41 596 - -
Sto10g0207 602 SUPERFAMILY EF-hand 440 594 IPR011992 -
Sto10g0207 602 CDD STKc_CAMK 149 409 - -
Sto10g0207 602 Gene3D - 450 519 - -
Sto10g0207 602 SUPERFAMILY Protein kinase-like (PK-like) 144 441 IPR011009 -
Sto10g0207 602 Gene3D - 431 589 - -
Sto10g0207 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0207 Sto-Chr10 1727207 1731896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0207 1 598 EF-hand Containing Proteins AT3G50530 71.855 0.0 924
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sto10g0207 Pkinase 3.5e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0207 - K00924 gmx:100798913 1014.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0207 10 1727207 1731896 Sto10g0207 10 1727207 1731896 ECH