Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0179 ATGTCTTCGGATTCAGATTCAGATTCCCCAGCATCGCCGCCGCCGCCTCCTCCGCCGTCATCGGAGTCGGATGATCAGAACTCACCACCTCCTGCatcgccgccgccgccaccaccTTCCGAACAAGATTCCAACTCTTCGCCTTCTCCCCCTCCCCCTCCGCCACCACCGCCTTCTTCCGGCAATGGCGGCGGCGACGACGACCGGAGATCACCTAACCCGCCGCCACCGCCACCACCCCCTTCGTCCCGCACATCAAACCATGGGTTTTCATCTCCATCTTCACAACATCGATTGGCTCCTCCAGTATATgattcatcatcatcctcagGGTATAACTCAGCCCAATTGAAGACAGGAATTATAGGAATTACAGTTGGAGCTGGGATATTATTGGTGATTATTGCTATGCTATTTGTCATTGGCATTGCATGTTTAAGAAGGAGGAAGAAATCAGAGCTTCCCCAATATTACTATAGTCCTCCAGGGAaacatgCTGATGACTATAACAAGTGTGCATCATTTCCAAATCATCAACAATGGAGTAGTGGGTACAAATACAATAATGGTGAACCAATTCCACCTACAGATGCAGGTAAAAAGGCTGTACCCCCAGCTCCACAAAAGTTAAATAATGAAATGAGAAACTTTAGTTCTGGCCCCCAAGGCCCCATATTGCCACCTCCACACCCTTCAGTGGCTCTTGGATTCCAGAAAAACACCTTCACATTTGATGAGTTATCAGCTGCCACTGCTGGGTTTGCTCAAGCTAACCTCATAGGTCAAGGAGGATTTGGATACGTACACATAGGTGTTCTACCCAATGGTAAGAAGGTAGCTGTGAAGAGCCTCAAATCGTTTGGAGGGCAAGGAGACAAAGAATTCCAAGCTGAGCTTGAGGTTATTAATCGTGTCCATCATCGCCATCTTGTGTCACTTGTGGGGTATTGTTCTGCAGAGGGCAAAAACCTATTGGTGTATGAATTTGTGCCTAACAAAACCCTGGAATTTCACCTTCATGGAAAAGGTCAACCTGCCATGGAATGGAGCATCAGGCTCAAAATTGCGATTGGATCAGCCAAAGGACTTGCTTACTTGCATGAAGATTGTAGCCCTCGTATTATTCATCGGGACATAAAGGGTGCAAACATTCTCATCGAAGACAATTTTGAAGCCAAAGTGGCTGATTTTGGATTGGCGAGGTTTAACAAAGACAACAACACTCATGTTTCTACCCGTGTAATGGGTACATTTGGGTATTTGGCTCCTGAGTATGCATCAAGCGGTAAGTTAACTGAGAAGTCTGATGTCTTCTCGTATGGTGTCATGCTTTTGGAGCTAATTACAGGACGACCTCCCATTGATTTAACTGGTGACTACGAAGAAGACAGTTTAGTTGAATGGGCTAGACCTCTTTGTGCAAAGGCATTGGAAAGTGGAAACTATGAAGGACTGGCGGATCCACGATTGGAGAACAATTATGAAAAGCAAGAGATGGCACGTATGGTGGCTTGTGCTGCTGCTAGTGTTAGGCACTCATCAAGGAAGAGGCCAAAAATGAGCCAGATTGTACGAGTTTTGGATGGCAATGTGTCACTAGAAGACCTGGATAAAGGGATGAAGATTGGCCAAAGTTCAATGCATAGAAATGCTAGTTCAAGTTCTGACTATGATGCTAGCACACAGAAAGCGGACATGGATAGGTTTAGAAAGCTAGTATTTGATAGCAGCAATGGAAGTAGCGACTCTGATGAATGTGCCTCAAAGACACAAACTCCAATGCACATTCCTTGA 1794 0.4465 MSSDSDSDSPASPPPPPPPSSESDDQNSPPPASPPPPPPSEQDSNSSPSPPPPPPPPPSSGNGGGDDDRRSPNPPPPPPPPSSRTSNHGFSSPSSQHRLAPPVYDSSSSSGYNSAQLKTGIIGITVGAGILLVIIAMLFVIGIACLRRRKKSELPQYYYSPPGKHADDYNKCASFPNHQQWSSGYKYNNGEPIPPTDAGKKAVPPAPQKLNNEMRNFSSGPQGPILPPPHPSVALGFQKNTFTFDELSAATAGFAQANLIGQGGFGYVHIGVLPNGKKVAVKSLKSFGGQGDKEFQAELEVINRVHHRHLVSLVGYCSAEGKNLLVYEFVPNKTLEFHLHGKGQPAMEWSIRLKIAIGSAKGLAYLHEDCSPRIIHRDIKGANILIEDNFEAKVADFGLARFNKDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSYGVMLLELITGRPPIDLTGDYEEDSLVEWARPLCAKALESGNYEGLADPRLENNYEKQEMARMVACAAASVRHSSRKRPKMSQIVRVLDGNVSLEDLDKGMKIGQSSMHRNASSSSDYDASTQKADMDRFRKLVFDSSNGSSDSDECASKTQTPMHIP 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0179 597 MobiDBLite consensus disorder prediction 1 112 - -
Sto10g0179 597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 374 386 IPR008271 GO:0004672|GO:0006468
Sto10g0179 597 MobiDBLite consensus disorder prediction 574 597 - -
Sto10g0179 597 Gene3D Phosphorylase Kinase; domain 1 231 329 - -
Sto10g0179 597 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK5 4 581 - -
Sto10g0179 597 ProSiteProfiles Protein kinase domain profile. 254 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g0179 597 SUPERFAMILY Protein kinase-like (PK-like) 233 527 IPR011009 -
Sto10g0179 597 SMART serkin_6 254 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g0179 597 ProSitePatterns Protein kinases ATP-binding region signature. 260 282 IPR017441 GO:0005524
Sto10g0179 597 Pfam Protein tyrosine and serine/threonine kinase 258 525 IPR001245 GO:0004672|GO:0006468
Sto10g0179 597 Gene3D Transferase(Phosphotransferase) domain 1 330 546 - -
Sto10g0179 597 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 4 581 - -
Sto10g0179 597 MobiDBLite consensus disorder prediction 85 112 - -
Sto10g0179 597 MobiDBLite consensus disorder prediction 9 61 - -
Sto10g0179 597 MobiDBLite consensus disorder prediction 70 84 - -
Sto10g0179 597 MobiDBLite consensus disorder prediction 542 597 - -
Sto10g0179 597 MobiDBLite consensus disorder prediction 545 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0179 Sto-Chr10 1461400 1464806 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0179 93 583 Trihelix Transcription Factor Family AT1G70460 49.095 1.73e-148 443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Sto10g0179 PK_Tyr_Ser-Thr 2.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0179 - - gmx:100806299 602.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0179 10 1461400 1464806 Sto10g0179 10 1461400 1464806 ECH
Sto2g0698 2 5932640 5943841 Sto10g0179 10 1461400 1464806 ECH