Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0171 ATGGTGGATCGTCGGCGAAGCTTAGTGTCTCTTGGGTTCTTGCTCTCTTTGCTGTTTCAGTTCACATTTGAACAGATTGAGCCACTGAGTTCAACCACAGAGCGAGCTGCTCTCTTTGACCTTAGATCGTCTCTGGGCTTGAGGAGCAAGGAATGGCCAAGGAAGGTCGACCCTTGCTCTTCCTGGAGAGGTGTCACATGCGAGAATGGTCGAGTCATTGGGATCAATATTTCTGGGTTTAGAAGAACACGAATTGGTAGGCAAAACCCTCAATTTGCAGTCGATGCCTTAACCAATTTGACCCTCTTGCAAACTCTCAATGCCTCCAATTTTCTGCTTCCTGGTTCTATTCCTGAATGGTTTGGCCTTCAGCTTTCTTCCCTCACTGTGCTTGACCTTCGCTCTTGCTCTATCAATGGTGCTATTCCTTCCAGTCTAGGGAATTTAACCAACCTCACTAGTCTCTATTTATCTCATAATAGTCTTACTGGGACAATACCTGATAGCCTTGGTCAACTGCTAGGACTTTCTGTTCTTAATCTTTCTCGGAATTCCCTTACTGCTTCCATTCCAACATCATTTGCCTCTCTTGTGAATCTTTCCTCTCTTGATATTTCCACCAATTTTTTGTCTGGGTCGATTCCTCCAGGCATTGGGTCCCTTACCAGGTTACAATACTTGAATCTCTCTGGTAATAGCCTATCATCTTCTATACCGTCTCAGCTGGGAAATATTAGTAGCTTGGTTGACCTTGATCTTAGTTTTAATTCTTTGTCTGGTGTGGTGCCTGTGGAATTAAGAGGGCTGAGGAGCTTGCAGAGAATGATACTAGGGAACAACATGCTCAATGGAGCTTTGCCGGAGAATTTGTTTGCTAATTCGTCGCAGCTTCAGTTCGTAGTGCTGGGAGGGAACAATTTTACTGGTGCTTTGCCTGATGGGTTGTGGTCTCTCCCAAGATTGAACTTCCTTGACCTCTCTGCCAATAACTTCACTGGTGTGCTTCCAAATTCTAGTTCAAACCCTAATGTTACTGCTGCTGAGCTTAATATTTCTAATAATATGTTTTATGGAAGCTTGAGTCCTCTTCTTAGAAGGTTCAGTTTCATTGATCTTTCGAGCAATTATTTTGAGGGCAAGATTCTGGATTTTATGCTCAATGTATCTGTAGATACCAACTGCCTCCAAAATGTGTCTAATCAGAGGACGACCGAAGAATGTGCATCATTTTACACCGAGAGGGGTCTCACTTTTGATAATTTTGGACGCCCAAATTCGACGGGACCTCCTGCTGCAGAAAGCTCTGGTAAGAGCAATAGAAATAAGATTATATTGGCTGCAGTGTTGGGTGGAGTTGGTTTAGCTATAATTTTGTTGTTACTGGTATTATGGTTCATTTGTACTCGTAAGAGGGGTAattcaaatcaaaggggtaacgGTGTGGGCCCTGCTCCTGCTGGGAGCAGCCCTCCACCTCCTGGCGTGTCGATCAATTTTATAAATGTCGGAGACTCATTTACAATTCAGCAGCTGCTTCAGGCTGCAGGCGATTTTGGTGATGCGAATCTTATCAAGCATGGCCACTCTGGGGATCTCTTCAATGGTGTTCTGGAAAGTGGTATTCCTGTGGTTATTAAAAGGATTGATGTGCGTTCGACTAAAAAAGATTCGTACCTATTGGAATTGGATTTTTTCAGTAAGATTTCTCATACAAGATTTGTTCCTCTGCTGGGTCACTGCttagaaaatgagaatgagaagtaCCTGGTCTATAAGCATATGCCTAACGGGGACTTGTCGAATAGTTTGTACTACCAAAAAACTACATCTGAAGATGGTACTTTGCAGTCATTGGACTGGATAACAAGGTTGAAAATTGCTACTGGAGCTGCAGAAGCCCTATCTTATCTCCATCATGAGTGTAATCCACCCTTTGTTCATAGAGATATACAAGCAAGCAGTATACTTCTAGATGATAAATATGAAGTTCGGTTAGGGAGTCTAAGTGAAGTCTGCACTCAAGAAGGAGATACTCATCAAAGCAAAATTACAAGGCTGCTAAGGCTGCCCCATTCCTTGGCTAGGGAAGCCATGGGATGGTTCTTGAATCATGATAAACCTCCAAGGTCCTCTGAACCAGGCACATCTGGTTCATCGACATCCATTTGTGCCTATGATGTTTATTGCTTTGGGAAAATATTGCTCGAGTTGGTGACCGGTAAGATGGGAATTAGTGCATCCAGTGATACTGAACTAAAGGAATTGTTGGAACAGACACTACCATACATTAGTATTTATGACAAGGAGCTTGTGACGAAAATTGTGGATCCATCTCTGATTGTTGATGAGGATTTCTTAGAGGAAGTATGGGCAATGGCCATTGTTGCTAGGTCttgcctaaatcccaaaccttcaAGAAGACCCCCAATGAGATATGTTCTTAAGGCTTTAGAAAACCCCTTAAAAGTCGTTAGGGAAGAAAGCACCGGTTCCTCGCGGCTTAGAGCAACGTCTTCTAGAGGCTCTTGGAATGCCGCATTATTTGGTAGTTGGCGTCAGAGTTCATCCGATGTAACAGTAATCCCAGCAGCCTCGGGTACAAAGGTAGAAGGAGCGAGTAGTATAAAGCATTCAGGGACAACCGGCTCACAGTCACAGGGTAGCGGTGGCCACAACGGTGGACTAGCAGAAGGCTCAGAGTCAGTGATACAGCAGCCGGCAGGATTTCCTGGTCCGATGATGCCTGTATTGGAAGGCACATAG 2763 0.4314 MVDRRRSLVSLGFLLSLLFQFTFEQIEPLSSTTERAALFDLRSSLGLRSKEWPRKVDPCSSWRGVTCENGRVIGINISGFRRTRIGRQNPQFAVDALTNLTLLQTLNASNFLLPGSIPEWFGLQLSSLTVLDLRSCSINGAIPSSLGNLTNLTSLYLSHNSLTGTIPDSLGQLLGLSVLNLSRNSLTASIPTSFASLVNLSSLDISTNFLSGSIPPGIGSLTRLQYLNLSGNSLSSSIPSQLGNISSLVDLDLSFNSLSGVVPVELRGLRSLQRMILGNNMLNGALPENLFANSSQLQFVVLGGNNFTGALPDGLWSLPRLNFLDLSANNFTGVLPNSSSNPNVTAAELNISNNMFYGSLSPLLRRFSFIDLSSNYFEGKILDFMLNVSVDTNCLQNVSNQRTTEECASFYTERGLTFDNFGRPNSTGPPAAESSGKSNRNKIILAAVLGGVGLAIILLLLVLWFICTRKRGNSNQRGNGVGPAPAGSSPPPPGVSINFINVGDSFTIQQLLQAAGDFGDANLIKHGHSGDLFNGVLESGIPVVIKRIDVRSTKKDSYLLELDFFSKISHTRFVPLLGHCLENENEKYLVYKHMPNGDLSNSLYYQKTTSEDGTLQSLDWITRLKIATGAAEALSYLHHECNPPFVHRDIQASSILLDDKYEVRLGSLSEVCTQEGDTHQSKITRLLRLPHSLAREAMGWFLNHDKPPRSSEPGTSGSSTSICAYDVYCFGKILLELVTGKMGISASSDTELKELLEQTLPYISIYDKELVTKIVDPSLIVDEDFLEEVWAMAIVARSCLNPKPSRRPPMRYVLKALENPLKVVREESTGSSRLRATSSRGSWNAALFGSWRQSSSDVTVIPAASGTKVEGASSIKHSGTTGSQSQGSGGHNGGLAEGSESVIQQPAGFPGPMMPVLEGT 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0171 920 MobiDBLite consensus disorder prediction 869 920 - -
Sto10g0171 920 Gene3D Ribonuclease Inhibitor 220 409 IPR032675 -
Sto10g0171 920 PANTHER BNAA07G03560D PROTEIN 169 866 - -
Sto10g0171 920 PANTHER BNAA07G03560D PROTEIN 10 188 - -
Sto10g0171 920 ProSiteProfiles Protein kinase domain profile. 518 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g0171 920 Gene3D Transferase(Phosphotransferase) domain 1 594 836 - -
Sto10g0171 920 Pfam Protein tyrosine and serine/threonine kinase 524 813 IPR001245 GO:0004672|GO:0006468
Sto10g0171 920 ProSiteProfiles Leucine-rich repeat profile. 151 173 IPR001611 GO:0005515
Sto10g0171 920 Pfam Leucine rich repeat N-terminal domain 33 67 IPR013210 -
Sto10g0171 920 Gene3D Ribonuclease Inhibitor 29 216 IPR032675 -
Sto10g0171 920 MobiDBLite consensus disorder prediction 871 892 - -
Sto10g0171 920 SMART LRR_typ_2 149 172 IPR003591 -
Sto10g0171 920 SMART LRR_typ_2 221 244 IPR003591 -
Sto10g0171 920 SMART LRR_typ_2 245 268 IPR003591 -
Sto10g0171 920 SMART LRR_typ_2 318 341 IPR003591 -
Sto10g0171 920 SMART LRR_typ_2 173 196 IPR003591 -
Sto10g0171 920 SMART LRR_typ_2 269 293 IPR003591 -
Sto10g0171 920 SMART LRR_typ_2 197 220 IPR003591 -
Sto10g0171 920 SMART LRR_typ_2 125 148 IPR003591 -
Sto10g0171 920 Pfam Leucine rich repeat 150 208 IPR001611 GO:0005515
Sto10g0171 920 Pfam Leucine rich repeat 223 282 IPR001611 GO:0005515
Sto10g0171 920 Gene3D Phosphorylase Kinase; domain 1 497 593 - -
Sto10g0171 920 SUPERFAMILY Protein kinase-like (PK-like) 493 817 IPR011009 -
Sto10g0171 920 SUPERFAMILY L domain-like 90 415 - -
Sto10g0171 920 PANTHER RECEPTOR-LIKE PROTEIN 55 169 866 - -
Sto10g0171 920 PANTHER RECEPTOR-LIKE PROTEIN 55 10 188 - -
Sto10g0171 920 Pfam Leucine Rich Repeat 127 149 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0171 Sto-Chr10 1411280 1416941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0171 30 691 Miscellaneous Gene Families AT2G16250 59.043 0.0 756
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Sto10g0171 PK_Tyr_Ser-Thr 8.9e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0171 - - gmx:100776587 1198.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0171 10 1411280 1416941 Sto10g0171 10 1411280 1416941 ECH