Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0170 atggctTCAAGCTCTATGAGCAAACAAAAGCTATGTGAGTACTCCTCTTGGACACCAAAACAGAACAAGCTGTTTGAAAAGGCACTTGCAAAATATGACAGAGACACTCCTGAAAGATGGCAGAATGTGGCCAAAGCAGTTGGTGGGAAATCAGCTGAGGAAGTTAAGAGACACTATGAGATCCTCTTGGAGGATCTCAGACACATTGAGTCTGGTCATATTCCTGTCCCTAACTACAAATCTACTGCCAATGTTGATGAAGAACGGAGGACAGGACAGAGAGCAGAGAGCACAGATCAGATCAGAAGCGGATCGAGaaattcaaattcgaattccGATCGATCGAATCGTGTTTCATCAAACGGACCTTCGATTCGACGATATCGCCGTAAGGAGCAAAGGCTTGGCCGAGGGCATCGTTGTCGGTGGCCCATGCGAGCCCTCCGACGAAGCAACGGTACTCAACATCTGCGGAAGCCATTGAAGAAAGCGAGAGCGGAAACCCTAGGACTAGAACTGAGAGGGAATTAG 531 0.4614 MASSSMSKQKLCEYSSWTPKQNKLFEKALAKYDRDTPERWQNVAKAVGGKSAEEVKRHYEILLEDLRHIESGHIPVPNYKSTANVDEERRTGQRAESTDQIRSGSRNSNSNSDRSNRVSSNGPSIRRYRRKEQRLGRGHRCRWPMRALRRSNGTQHLRKPLKKARAETLGLELRGN 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0170 176 Pfam Myb-like DNA-binding domain 16 59 IPR001005 -
Sto10g0170 176 SMART sant 13 65 IPR001005 -
Sto10g0170 176 PANTHER PROTEIN RADIALIS-LIKE 3 1 83 - -
Sto10g0170 176 CDD SANT 16 63 IPR001005 -
Sto10g0170 176 SUPERFAMILY Homeodomain-like 15 71 IPR009057 -
Sto10g0170 176 ProSiteProfiles Myb-like domain profile. 15 63 IPR001005 -
Sto10g0170 176 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 83 IPR044636 GO:0003700
Sto10g0170 176 MobiDBLite consensus disorder prediction 73 163 - -
Sto10g0170 176 ProSiteProfiles SANT domain profile. 15 67 IPR017884 -
Sto10g0170 176 MobiDBLite consensus disorder prediction 97 123 - -
Sto10g0170 176 Gene3D - 13 76 - -
Sto10g0170 176 MobiDBLite consensus disorder prediction 130 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0170 Sto-Chr10 1388393 1394819 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto10g0170 Myb_DNA-binding 5.9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0170 - - gmx:100785292 153.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0170 10 1388393 1394819 Sto10g0170 10 1388393 1394819 ECH