Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0149 ATGGCTTCCTCAAGTGGAACATCTTCAGGTGGTTCTTCTCTGGTTCTTCAAAACTCTGGTTCCGAGGAGGATTTGCAGGTTCTGATAATGGatcagaggaagaggaagaggatgatATCGAATCGTGAATCAGCAAGGCGATCTAGGATGAGGAAGCAGAAGCATCTGGATGATTTGGTGGCTCAAGTGGGTCAGCTTAGGAAGGAGAATCACCATATTCTCACGAGTGTGAATCTCACAGCTGAACAATTGTTGAGAGTTGAATCTGAGAATTCTGTTCTTAGAGCTCAAGTGGGTGAGTTGAGTCATAGGCTTCAATCTCTCAATGAGATCATTGACTTCTTAAGTGCTTCTTCTTCAAGCTCTTTGATTGAGCCCATTAATGGCTTCTTCAACAACCCATTGAACATGGGACAGAGGAAATATCTTGGAATTTTCACACTTCCTAGGTAG 453 0.4084 MASSSGTSSGGSSLVLQNSGSEEDLQVLIMDQRKRKRMISNRESARRSRMRKQKHLDDLVAQVGQLRKENHHILTSVNLTAEQLLRVESENSVLRAQVGELSHRLQSLNEIIDFLSASSSSSLIEPINGFFNNPLNMGQRKYLGIFTLPR 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0149 150 CDD bZIP_plant_GBF1 34 84 IPR045314 GO:0003700|GO:0006355
Sto10g0149 150 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 138 - -
Sto10g0149 150 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 31 94 IPR004827 GO:0003700|GO:0006355
Sto10g0149 150 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 36 51 IPR004827 GO:0003700|GO:0006355
Sto10g0149 150 SMART brlzneu 29 93 IPR004827 GO:0003700|GO:0006355
Sto10g0149 150 Gene3D - 31 86 - -
Sto10g0149 150 SUPERFAMILY Leucine zipper domain 33 84 IPR046347 GO:0003700|GO:0006355
Sto10g0149 150 Pfam bZIP transcription factor 33 84 IPR004827 GO:0003700|GO:0006355
Sto10g0149 150 PANTHER BZIP TRANSCRIPTION FACTOR 1 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0149 Sto-Chr10 1177742 1178913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0149 29 138 bZIP Transcription Factor Family AT4G34590 57.851 3.36e-40 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto10g0149 bZIP_1 2.6e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0149 K25786 - gmx:547956 183.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0149 10 1177742 1178913 Sto10g0149 10 1177742 1178913 ECH