Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0140 ATGGCTAAGCCAAAAGCTCCAAGACGAACCCTAGACTCATACACAGTCAAACCTGTAAACAAAACCATTAGAGCCGGAGACTGCGTTCTTATGCGGCCGTCCGATCCGTCGAAGCCGTCGTATGTGGCTAGGATCGAGCGGATCGAGGCGGACTCTCGTGGAACCAACGTGAAGGTCCACGTCCGGTGGTACTACCGGCCTGAGGAGTCAATCGGCGGCCGGAGACAGTTCCACGGTTCTAAGGAGGTTTTCCTCTCTGATCACTATGATGTTCAGAGCGCCGATACGATCGAAGGCAAGTGTACGGTTCACAGTTTCAAAAGCTACACGAAGCTTGATGCTGTTGGAAACGACGATTTCTTCTGTCGCTTCGAATACAATTCCGCCACCGGAGCTTTCAATCCTGATAGAGTCGCCGTGTACTGTAAATGTGAGATGCCCTACAATCCTGATGACTTAATGGTCATGTGTGAAGGTTGCAGTGATTGGTAA 492 0.5081 MAKPKAPRRTLDSYTVKPVNKTIRAGDCVLMRPSDPSKPSYVARIERIEADSRGTNVKVHVRWYYRPEESIGGRRQFHGSKEVFLSDHYDVQSADTIEGKCTVHSFKSYTKLDAVGNDDFFCRFEYNSATGAFNPDRVAVYCKCEMPYNPDDLMVMCEGCSDW 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0140 163 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 136 163 IPR013083 -
Sto10g0140 163 PANTHER CHROMATIN REMODELING PROTEIN SHL 1 163 IPR045205 GO:0006325|GO:0035064
Sto10g0140 163 Pfam BAH domain 22 136 IPR001025 GO:0003682
Sto10g0140 163 Gene3D - 3 135 IPR043151 -
Sto10g0140 163 ProSiteProfiles BAH domain profile. 21 137 IPR001025 GO:0003682
Sto10g0140 163 PANTHER OS08G0421900 PROTEIN 1 163 - -
Sto10g0140 163 SMART BAH_4 21 137 IPR001025 GO:0003682
Sto10g0140 163 SUPERFAMILY FYVE/PHD zinc finger 131 163 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0140 Sto-Chr10 1119439 1120513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0140 31 139 Core DNA Replication Machinery Family AT4G14700 28.440 6.91e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0140 - - zju:107426744 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0140 10 1119439 1120513 Sto10g0140 10 1119439 1120513 ECH