Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0116 ATGGCTGCTTCCAATCTCTCAACACTCTCTTCGTCCTTTTCTAAACCCTCTTCTCTCCCTCTCAACAACTCCCACAACATCACACACACTTATTTCCCTCCCAAAACCCTCACAAAACCCTCTTTCTCTCGCAAATCCTCTCTCGCAGTTTCATCCAAAAACCCAATTTCCGACATTCTCTCCGCAAATAAACCCTACCCAGAAATCCACctcgacgacgacgacgacgaaaAGCCTCGCGAGGAGTGTGGTGTGGTGGGAATATACGGCGACCCAGAAGCTTCTCGTCTCTGCTATTTGGCCCTTCACGCTCTGCAACACCGAGGGCAAGAAGGTGCCGGAATCGTCGCTGTGAACGACAACGTTCTTCAATCGATCACCGGCGTTGGGCTCGTTTCCGATGTATTCAACGAATCGAAGCTCGATCAATTACCTGGAAGTTTGGCTATAGGACATGTTCGATACTCCACAGCAGGACAATCGATGCTCAAGAATGTTCAACCCTTCGTCGCAGGATATCGATTTGGGTCCGTTGGGGTTGCTCACAATGGGAATCTGGTGAATTATCGAACACTAAGAGCCAAGCTTGAAGAGAATGGTTCTATCTTCAACACTAGTTCAGATACTGAGGTAGTTCTTCATCTTATTGCGACTTCAAAGCATAGGCCCTTTTTGTTGAGGATTGTTGATGCTTGTGAGAAGCTTGAAGGAGCTTATTCTATTGTGTTTGTGACAGAGGATAAGCTTGTGGCTGTTAGGGATCCATTTGGGTTTAGACCTTTGGTTATGGGAAGGAGAAGCAATGGTGCTATTGTTTTTGCTTCCGAAACTTGTGCTCTTGATTTGATTGAAGCCACATATGAAAGAGAGGTGAATCCAGGGGAGGTATTGGTGGTAGATAAAAATGGGCTTCAATCTTTGTGTTTGATGCCTCATCCACAGCCAAAACAATGCACTTTTGAGCATATTTACTTTGCACTTCCTAACTCTGTGGTTTTTGGGAGATCAGTGTATGAATCCAGGAGAAAATTTGGGGAGATTCTAGCCACAGAAAGCCCTGTGGATTGTGATGTTGTGATTGCAGTTCCAGATTCTGGTGTGGTAGCTGCATTAGGCTATGCTGCTAAAGCTGGGGTTCCATTTCAACAAGGGCTAATCAGATCCCACTATGTGGGAAGAACTTTCATTGAACCATCACAGAAGATTAGGGACTTTGGGGTGAAACTGAAACTCTCACCAGTCAGAGCTGTGCTTGAAGGTAAGAGGGTAGTGGTTGTGGATGACTCAATTGTGAGAGGAACCACATCTTCAAAGATTGTGAGGTTGATTAAGGAAGCAGGTGCTAAAGAAGTTCATATGAGGATTGCAAGCCCACCCATAATTGCTTCATGCTATTATGGGGTGGACACACCAAGTTCAGAGGAGTTGATCTCAAACAGGATGAGTGTAGAGGAGATTAGAGAGTTTATTGGGTCAGATTCACTTGCTTTTCTTCCATTTGATAGCTTGAAGAAGCTTTTGGGAAGTGATTCACCTAACTTTTGTTATGCTTGCTTCTCTGGGAACTACCCAGTTGAGCCTAGAGAGCTTAAGGTGAAGAGGGTGGGTGATTTTGTGGATGATGGCTTAAATGGGAGTTTGGaatccattgatggaggttgggtTAAAGCAAGTGCGCTAACCCATATAGTTGGTGGTTTCTGCATGTTTGAACTGGGGATGTTGCGGAGAACCGTGGTCTTTGAACACATGtga 1755 0.4382 MAASNLSTLSSSFSKPSSLPLNNSHNITHTYFPPKTLTKPSFSRKSSLAVSSKNPISDILSANKPYPEIHLDDDDDEKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVAVNDNVLQSITGVGLVSDVFNESKLDQLPGSLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYRTLRAKLEENGSIFNTSSDTEVVLHLIATSKHRPFLLRIVDACEKLEGAYSIVFVTEDKLVAVRDPFGFRPLVMGRRSNGAIVFASETCALDLIEATYEREVNPGEVLVVDKNGLQSLCLMPHPQPKQCTFEHIYFALPNSVVFGRSVYESRRKFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLIKEAGAKEVHMRIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFIGSDSLAFLPFDSLKKLLGSDSPNFCYACFSGNYPVEPRELKVKRVGDFVDDGLNGSLESIDGGWVKASALTHIVGGFCMFELGMLRRTVVFEHM 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0116 584 SUPERFAMILY PRTase-like 318 529 IPR029057 -
Sto10g0116 584 CDD PRTases_typeI 345 456 IPR000836 -
Sto10g0116 584 Gene3D - 342 506 IPR029057 -
Sto10g0116 584 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 83 306 IPR029055 -
Sto10g0116 584 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC 31 556 - -
Sto10g0116 584 CDD GPATase_N 83 333 IPR035584 -
Sto10g0116 584 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 83 524 IPR029055 -
Sto10g0116 584 Pfam Glutamine amidotransferase domain 161 280 IPR017932 -
Sto10g0116 584 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 83 302 IPR017932 -
Sto10g0116 584 Pfam Phosphoribosyl transferase domain 342 452 IPR000836 -
Sto10g0116 584 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 31 556 - -
Sto10g0116 584 Hamap Amidophosphoribosyltransferase [purF]. 82 523 IPR005854 GO:0004044|GO:0009113
Sto10g0116 584 TIGRFAM purF: amidophosphoribosyltransferase 83 524 IPR005854 GO:0004044|GO:0009113
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0116 Sto-Chr10 885937 888010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0116 63 556 PRT Gene Family AT2G16570 85.484 0.0 872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0116 K00764 - gmx:100791919 949.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0116 10 885937 888010 Sto10g0116 10 885937 888010 ECH