Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0112 ATGTCGCCGGCGGCCGGAAAGAGCAGCAAAATCCGACACATTGTCCGAATCCGGCAAATGCTCATGCGGTGGCGGAAGAAGGCGCGCATAACGGCGGTGCGAGCTCCGTCCGACGTGCCTGCCGGCCACGTGGCGGTGTGCGTCGGGCCGAGCTGCCGGAGATTCATCGTGCGCGCGACGTACCTGAACCATCCGGTCTTCAATAAGCTTCTGGTTCAAGCCGAAGAGGAGTACGGCTTCTGCAACCAAGGTCCGTTGACGATCCCGTGCGACGAGTCGATGTTCGAGGAGGTGCTCCGGTTCGTGTCCCGGTCCGAGTCGACTCACTCCGCCCGGTTATCGAGCCTCGAAGATTTCCAGAGGCGCTGCCACGTGGACGTCCGAAATAGTTTTTATGACTTTGTAGGAGAATCCAGGCCCTTGCTTCACGACGAGCCAATCTGTTGA 447 0.5973 MSPAAGKSSKIRHIVRIRQMLMRWRKKARITAVRAPSDVPAGHVAVCVGPSCRRFIVRATYLNHPVFNKLLVQAEEEYGFCNQGPLTIPCDESMFEEVLRFVSRSESTHSARLSSLEDFQRRCHVDVRNSFYDFVGESRPLLHDEPIC 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0112 148 Pfam Auxin responsive protein 16 101 IPR003676 GO:0009733
Sto10g0112 148 PANTHER SMALL AUXIN-UP RNA-RELATED 6 144 - -
Sto10g0112 148 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 144 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0112 Sto-Chr10 864068 864514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0112 6 142 Calmodulin-binding Proteins AT4G34750 52.083 6.51e-45 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0112 K14488 - jre:108986945 224.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0112 10 864068 864514 Sto10g0112 10 864068 864514 ECH