Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0108 ATGGGTTTTCACTTACCGGGTATCAGACGGGCATCATTTTCTGCTTGGAAGGCAGTGGAAATCCCAAAGGGATACCTTGCAGTCTATGTTGGAGAGAAAATGAAGCGCTTCATTATTCCTGTATCTTACTTGAACCAACCTTCATTTCAAGAATTACTCAGTCAAGCTGAAGAAGAATTCGGTTATGATCATCCAATGGGCGGTCTTACAATTCCTTGTGGAGAAGATGTTTTCCAAGAACTCACTTCTCGCTTGAATAGaaTACAAGTTAAAAGGGAAAATGTTAATGATGATACTTTCCAGCAGAAACAAGAAACTGCTGTACTTGCAGAGTTGGCTAAAATCATAAAAACTGAAATTCTCTCTGTGTAA 372 0.3898 MGFHLPGIRRASFSAWKAVEIPKGYLAVYVGEKMKRFIIPVSYLNQPSFQELLSQAEEEFGYDHPMGGLTIPCGEDVFQELTSRLNRIQVKRENVNDDTFQQKQETAVLAELAKIIKTEILSV 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0108 123 Coils Coil 78 98 - -
Sto10g0108 123 Pfam Auxin responsive protein 18 84 IPR003676 GO:0009733
Sto10g0108 123 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 86 IPR003676 GO:0009733
Sto10g0108 123 PANTHER AUXIN-INDUCED PROTEIN 6B 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0108 Sto-Chr10 838702 839867 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0108 20 81 Calmodulin-binding Proteins AT3G43120 54.839 3.64e-19 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0108 K14488 - gmx:100806671 150.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0108 10 838702 839867 Sto10g0108 10 838702 839867 ECH