Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0107 ATGGGTTTTCGTTTACCCGGAATAATCAGAAGGGCTTCTTTCTCAGCAAATCAAGCATCTTCAAAAGGAGTTAATTATGTGCCAAAAGGGTATATTGCAGTGTATGTTGGGGAGAAAATGAAGAGGTTTGTGATTCCCATATCATACTTGAATCAACCTTCATTTCAAGACTTGTTGAGTCAAGCTGAGGAAGAATTTGGTTATCATCATCCAATGGGTGGCCTCACTTTTCCTTGCACAGAAGCAATGGGTTTTCGTCTGCCTGGTCTCACAAGAACTTCATCTTGTATCAGAAGAACATCATTTTCTTCGAACCAATCTGCTTCGAACGCAGTGGAAGTACCAAAGGGCTACCTTGCAGTCTATGTTGGGCAGAAAATGAAGCGATTTGTTATTCCTGTATCATACTTGAACCAACCTTCATTCCAAGAATTATTGAGTCAAGCAGAAGAAGAATTCGGTTATGATCATCCAATGAAAACAATGGGTTTTCGTTTACCTGGCATCAGAAGGGCTTCCCTTTCATCAAACCATGTATCTTCAAAAGGATTCGATGTGCCAAAGGGGTATCTCGCAGTGTATGTTGGGGAAAAGATGAAGAGGTTTGTGATTCCCATATCATACTTGAACCAACCTTCATTTCAAGACTTGCTGAGTCAAGCTGAGGAAGAATTTGGCTATGATCATCCTATGGGAGGTCTCACAATACCTTGCAAAGAAGATGCTTTTGAGAATATAACTTCTCGCGTgtggaaaaacaaaaaaacaatggGTTTCCGTTTACCGGGTATCAGACGGGCATCATTTTCTGCAACCAAATCTCCTGGGAAGGAAGTGGCAAACCATGCATCTTCAAAAGGAGTCAATGTGCCAAAAGGGTATGTTGCAGTGTATGTTGGGGAGAGAATGAAGAGGTTTGTGATTCCCATATCATACTTGAATCAACCTTCATTTCAAGACTTGCTAAGTCAAGCTGAGGAAGAATTTGGCTATGATCATCCAATGGGTGGCCTCACAATTCCTTGTGGAGAAGATTCCTTTGAGACAAACCATGTATCTTCAAAAGGATTTGATGTGCCAAAGGGTTATCTTGCAGTGTATGTTGGCGAAAAGATGAAGAGGTTTGTGATTCCCATATCATTCTTGAACCAACCTTCATTTCAAGATTTGTTGAGTCAAGCTGAGGAAGAATTTGGCTATGATCATCCTATGGGAGGTCTCACAATACCTTGCACAGAAGATGCTTTTGAGAATATAACTTCTCGCTTTGTGGAGAAACATAAAACAATGGGTTTCCGTTTACCGCGTATCAGACGGACATCATTTTCAGCAACCAAATCTTCTGGGAAGGAAGTGGAAATCCCAAAGGGCTACCTTGCAGTCTATGTTGGAGAGCAAATGAAGCGCTTTGTTATTCCTGTGTCATACCTAAAGAAACCTTCATTCCAAGATTTACTGACTCAAGCTGAAGAAGAATTCGGGTATGATCATCCGATGAAAACAATGGGTTTTCGTTTACCTGGAATCAGAAGGGCTTCAATCTCAACAAATCAAGCATCTTCAAAAGGAGTTAATGTGCCAAAAGGGTATGTTGCAGTGTATGTTggggagaagatgaagaggttTGTGATTCCCATATCATACTTGAACCAACCTTCATTTCAAGACTTGCTGACTCAAGCTGAGGAAGAATTCGGTTATGATCATCCCATGGGTGGCCTCACAATTCCTTGCACAGAAGATTCAtttgtcaatttaatttctGGCTTGAATGGTATTAGAAGAATATCATTTTCTTCAAGTCAATCTGCTTGGAAGGAAGTGGAAGTGCCAAAGGGCTATCTAGCAGTCTATGTTGGAGAGGAAATGAAGCGCTTTGTTATCCCTATATCATACTTGAACCAACCTTCATTCCAAGAGTTACTCAATCAAGCTGAAGAAGAATTCGGTTATGACCATCCAATGGGTGGTCTTAGAATCCCTTGCAGCTGGTCTCAAAAGGGCATCATCTTCAAAAGGTGTCAATGTGCCAAAGGGCTATCTTGCAGTCTACGTCggagagaagatgaagagatttGTGATTCCAATATCATACTTGAACCAGCCTTCGTTTCAAGACTTGTTAAGTCAAGCTGA 2136 0.397 MGFRLPGIIRRASFSANQASSKGVNYVPKGYIAVYVGEKMKRFVIPISYLNQPSFQDLLSQAEEEFGYHHPMGGLTFPCTEAMGFRLPGLTRTSSCIRRTSFSSNQSASNAVEVPKGYLAVYVGQKMKRFVIPVSYLNQPSFQELLSQAEEEFGYDHPMKTMGFRLPGIRRASLSSNHVSSKGFDVPKGYLAVYVGEKMKRFVIPISYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCKEDAFENITSRVWKNKKTMGFRLPGIRRASFSATKSPGKEVANHASSKGVNVPKGYVAVYVGERMKRFVIPISYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCGEDSFETNHVSSKGFDVPKGYLAVYVGEKMKRFVIPISFLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCTEDAFENITSRFVEKHKTMGFRLPRIRRTSFSATKSSGKEVEIPKGYLAVYVGEQMKRFVIPVSYLKKPSFQDLLTQAEEEFGYDHPMKTMGFRLPGIRRASISTNQASSKGVNVPKGYVAVYVGEKMKRFVIPISYLNQPSFQDLLTQAEEEFGYDHPMGGLTIPCTEDSFVNLISGLNGIRRISFSSSQSAWKEVEVPKGYLAVYVGEEMKRFVIPISYLNQPSFQELLNQAEEEFGYDHPMGGLRIPCSWSQKGIIFKRCQCAKGLSCSLRRREDEEICDSNIILEPAFVSRLVKSS 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0107 711 PANTHER AUXIN-INDUCED PROTEIN 10A5 346 423 - -
Sto10g0107 711 PANTHER AUXIN-INDUCED PROTEIN 10A5 509 592 - -
Sto10g0107 711 PANTHER AUXIN-INDUCED PROTEIN 10A5 169 250 - -
Sto10g0107 711 PANTHER AUXIN-INDUCED PROTEIN 10A5 1 82 - -
Sto10g0107 711 PANTHER AUXIN-INDUCED PROTEIN 10A5 280 348 - -
Sto10g0107 711 PANTHER AUXIN-INDUCED PROTEIN 10A5 593 663 - -
Sto10g0107 711 PANTHER AUXIN-INDUCED PROTEIN 10A5 437 502 - -
Sto10g0107 711 PANTHER AUXIN-INDUCED PROTEIN 10A5 94 162 - -
Sto10g0107 711 Pfam Auxin responsive protein 438 500 IPR003676 GO:0009733
Sto10g0107 711 Pfam Auxin responsive protein 99 160 IPR003676 GO:0009733
Sto10g0107 711 Pfam Auxin responsive protein 512 588 IPR003676 GO:0009733
Sto10g0107 711 Pfam Auxin responsive protein 594 663 IPR003676 GO:0009733
Sto10g0107 711 Pfam Auxin responsive protein 273 349 IPR003676 GO:0009733
Sto10g0107 711 Pfam Auxin responsive protein 171 248 IPR003676 GO:0009733
Sto10g0107 711 Pfam Auxin responsive protein 13 82 IPR003676 GO:0009733
Sto10g0107 711 Pfam Auxin responsive protein 354 421 IPR003676 GO:0009733
Sto10g0107 711 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 280 348 IPR003676 GO:0009733
Sto10g0107 711 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 593 663 IPR003676 GO:0009733
Sto10g0107 711 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 509 592 IPR003676 GO:0009733
Sto10g0107 711 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 437 502 IPR003676 GO:0009733
Sto10g0107 711 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 94 162 IPR003676 GO:0009733
Sto10g0107 711 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 346 423 IPR003676 GO:0009733
Sto10g0107 711 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 169 250 IPR003676 GO:0009733
Sto10g0107 711 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 82 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0107 Sto-Chr10 798506 837113 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0107 27 79 Calmodulin-binding Proteins AT3G43120 54.717 1.25e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0107 - K14488 gmx:112997918 240.736