Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0102 ATGGATTCAGCTAACTCCCAAGTAGAAGATGAAAAAATCCCGAACTCTTTTCAAAGTTGTGAGGCAAGTTTATCTGTGGGGAAGAAGTCTTTCAGGCCAAAGCTTCTTGCTTCCGTTGGTGCTTACGAAGTTTTCAGACCAGAGATGTGGAAGGCAGCTTTGACAGAGTCAGTAGCAACTGCTTCCCTAGTGTTCACCTTGACGACCTCCATCATTGCATGCTTGGACTCACATGAAGTCAATCCTAAGCTTCTTGTTCCCTTCGCAGTGTTCATCATAGCCTTCCTCTTCTTAATTGTGACAGTTCCTCTGACTGGTGGCCACATGAGTCCTGTTTTCACATTCATTGCTGCTTTAAAGGGTGTAGTAACTCCTGTTCGTGCTCTCGCTTACATATCAGCTCAATGCATTGGCTCAATACTTGGTTTTCTTGTAATTAGGAGTGTGATGGAGCCAAAGTTAGCAGAAATGTACTATTTGGGTGGCTGTAGTGTTAGTGGCAATGGAGAAAACCCTGGGATCAAGGAGCAAGTTGCTTTGCTATTAGAATTTTCTTGTACATTTGTGGTACTGTTTGTGGGGGTAACAGTAGCATTTGACAAGAAAAGGTCCAAAGATTTGGGCTTGCCAATGGTTTGTTTGGTGGTGGCAGGGTCCATGGCCTTGGCTGTATTTGTGTCCATAACTGTTACAGGGAAGGCTGGTTATGCAGGTGTGGGCCTGAATCCTGCAAGATGCTTGGGCCCAGCATTACTTGAAGGAGGCATTTTGTGGAAAGGGCATTGGGTTTTCTGGGTTGGGCCTGTTTTGGCTTGCACTATCTATTATGGTGTTTCTGTTAATTTGCCAAAGGAAGGTTTGGTTTGGGTAGAAGAAGAGCATGATATCTTAAAGTTGGGTGAGGCTTGTTTTTGCAGAACAAGCAGAGCCTCTTCTTTTGCTGAAGTATAA 951 0.4437 MDSANSQVEDEKIPNSFQSCEASLSVGKKSFRPKLLASVGAYEVFRPEMWKAALTESVATASLVFTLTTSIIACLDSHEVNPKLLVPFAVFIIAFLFLIVTVPLTGGHMSPVFTFIAALKGVVTPVRALAYISAQCIGSILGFLVIRSVMEPKLAEMYYLGGCSVSGNGENPGIKEQVALLLEFSCTFVVLFVGVTVAFDKKRSKDLGLPMVCLVVAGSMALAVFVSITVTGKAGYAGVGLNPARCLGPALLEGGILWKGHWVFWVGPVLACTIYYGVSVNLPKEGLVWVEEEHDILKLGEACFCRTSRASSFAEV 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0102 316 Pfam Major intrinsic protein 46 270 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto10g0102 316 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 18 310 - -
Sto10g0102 316 PANTHER AQUAPORIN-LIKE 18 310 - -
Sto10g0102 316 SUPERFAMILY Aquaporin-like 42 274 IPR023271 -
Sto10g0102 316 Gene3D Glycerol uptake facilitator protein. 36 284 IPR023271 -
Sto10g0102 316 PRINTS Major intrinsic protein family signature 51 70 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto10g0102 316 PRINTS Major intrinsic protein family signature 90 114 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto10g0102 316 PRINTS Major intrinsic protein family signature 127 146 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto10g0102 316 PRINTS Major intrinsic protein family signature 182 200 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto10g0102 316 PRINTS Major intrinsic protein family signature 223 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto10g0102 316 PRINTS Major intrinsic protein family signature 262 282 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0102 Sto-Chr10 761773 763368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0102 102 285 Major Intrinsic Protein MIP AT1G17810 33.508 1.77e-20 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0102 K09866 - gmx:100804160 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0102 10 761773 763368 Sto10g0102 10 761773 763368 ECH