Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0090 ATGGCGGCTACTGTATCTGCGTGGTCTAAAGCTGGCGCGTGGGCGCTGGATTCCGAAGAACACGAAGCCGAGCTTCTTCATCAGAATGGGAAAGACAATACTTCTGATTTTCCTTCCCTTGCCGCCGCCGCAACAACAaaacccaagaagaagaaaccccaaaccctctcCTTGGCTGAGTTCACAACCTTCGGAGGCCCTAAGCCTGCCCACAACTCCCAATTAGATGTCTTGACGCATGAAGAACTCATGATGCTACCGACCGGTCCTCGCGAGCGAACCGCCGAGGAACTCGACCGGGACAGGAGTCGACTCGGCGGCGGTTTTAGGGCCTACGGTTCGTACGAACGGTCCAATAGGAATTCCGGCGGTGACGAGTCGTCTAATTCTCGTTGGGGTTCTTCTAGGGTTTCTGATGAGCCGAGGAGAAACGGTTCGTTTGGTAGGGATTCGAATCGTGAAGTGGCTCCTTCGCGAGCCGATGAGATAGATAATTGGGCTGCCGCCAAGAAATCTAGCGTTGGGAATGGATTTGAGAGGAGGGATAGGGATAGAGGAGGGTTTTTTGATTCACATTCAAGAGCTGACGAATCGGAGAGTTGGGGATCCAAGAAGAACTTCGTGCCATCAGAGGGACGGAGATTTGGTTCTAGTAATGGCGGTGGGTTTGAAAGGGAGAGAAAAGTTGGATTTGGTTCGAGCGGTGGTGCAGATTCGGATAATTGGAACAGGAAGAAGGTGGAATCTAACGGTGGGAATGAGACTGTAAGTGGGAGACCGAGACTTGTTCTGCAACCTCGATCAATGAGTAACGGAAACCAGGAGGGTTCTGGGAATGTGGCCAAACCCAAGGGTCCAAGTCCGTTTGGAGAGGCAAGGCCAAGGGAGGAGGTTTTGGCAGAGAAAGGGCAGGATTGGAAGAAGATTGATGAACAGCTTGAGACAACGAAGATTAACGAGACAGTGGAGCCAAAGGATGGATTTGGGAAGAGGGGTTCTGGGTATGGCAATGGGCGTACTAGTTTGCCAGATGATCGGACTGAGAGGAGTTGGAGGAAGGCTGAATCTGATGATAGTCGTCCAAATAGTGATaagaaagttgaaaatggagACGTTGAAGAAAACTAA 1128 0.4902 MAATVSAWSKAGAWALDSEEHEAELLHQNGKDNTSDFPSLAAAATTKPKKKKPQTLSLAEFTTFGGPKPAHNSQLDVLTHEELMMLPTGPRERTAEELDRDRSRLGGGFRAYGSYERSNRNSGGDESSNSRWGSSRVSDEPRRNGSFGRDSNREVAPSRADEIDNWAAAKKSSVGNGFERRDRDRGGFFDSHSRADESESWGSKKNFVPSEGRRFGSSNGGGFERERKVGFGSSGGADSDNWNRKKVESNGGNETVSGRPRLVLQPRSMSNGNQEGSGNVAKPKGPSPFGEARPREEVLAEKGQDWKKIDEQLETTKINETVEPKDGFGKRGSGYGNGRTSLPDDRTERSWRKAESDDSRPNSDKKVENGDVEEN 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0090 375 MobiDBLite consensus disorder prediction 289 327 - -
Sto10g0090 375 MobiDBLite consensus disorder prediction 115 135 - -
Sto10g0090 375 MobiDBLite consensus disorder prediction 27 56 - -
Sto10g0090 375 MobiDBLite consensus disorder prediction 83 375 - -
Sto10g0090 375 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 366 IPR010433 GO:0003743
Sto10g0090 375 MobiDBLite consensus disorder prediction 264 280 - -
Sto10g0090 375 MobiDBLite consensus disorder prediction 92 106 - -
Sto10g0090 375 MobiDBLite consensus disorder prediction 342 375 - -
Sto10g0090 375 Pfam Plant specific eukaryotic initiation factor 4B 7 325 IPR010433 GO:0003743
Sto10g0090 375 MobiDBLite consensus disorder prediction 136 166 - -
Sto10g0090 375 MobiDBLite consensus disorder prediction 175 201 - -
Sto10g0090 375 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 1 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0090 Sto-Chr10 675099 676903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0090 1 354 Eukaryotic Initiation Factors Gene Family AT4G38710 49.620 2.88e-73 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0090 - - pvu:PHAVU_011G033300g 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0090 10 675099 676903 Sto10g0090 10 675099 676903 ECH