Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0084 ATGGCATCCTCTGTTTCCCTGTACGAGGTTCTTGGGATTTCAATGGGCGCATCCTGCAAGGAGATAAAGGCAGCTTACAGGAAGCTAGCAAGAAGATGTCATCCTGATGTGGTGGCCATGAATCAGAAGGAATCCTCCGCCAACCACTTCATCAAGATTCATTCCGCCTATTCCACCTTGTCCGATCCCAACAAGCGAGCTCAATACGATAGACAATTTTATTATGCCCACAACACATCGCTCACTTCTCAAAATATTGCTTCCATCTATGGATTTCAGAATCATAGATATGCTCAATCTGGAATGAAATGGGAGACTGATCAGTGCTGGTAG 333 0.4505 MASSVSLYEVLGISMGASCKEIKAAYRKLARRCHPDVVAMNQKESSANHFIKIHSAYSTLSDPNKRAQYDRQFYYAHNTSLTSQNIASIYGFQNHRYAQSGMKWETDQCW 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0084 110 SMART dnaj_3 5 65 IPR001623 -
Sto10g0084 110 CDD DnaJ 8 62 IPR001623 -
Sto10g0084 110 ProSitePatterns Nt-dnaJ domain signature. 50 69 IPR018253 -
Sto10g0084 110 PANTHER DNAJ PROTEIN HOMOLOG-LIKE 1 110 - -
Sto10g0084 110 Pfam DnaJ domain 7 70 IPR001623 -
Sto10g0084 110 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 1 110 - -
Sto10g0084 110 Gene3D DnaJ domain 1 99 IPR036869 -
Sto10g0084 110 ProSiteProfiles dnaJ domain profile. 6 73 IPR001623 -
Sto10g0084 110 SUPERFAMILY Chaperone J-domain 2 81 IPR036869 -
Sto10g0084 110 PRINTS DnaJ domain signature 8 26 IPR001623 -
Sto10g0084 110 PRINTS DnaJ domain signature 26 41 IPR001623 -
Sto10g0084 110 PRINTS DnaJ domain signature 45 65 IPR001623 -
Sto10g0084 110 PRINTS DnaJ domain signature 65 84 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0084 Sto-Chr10 650753 651085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0084 8 70 C2H2 Transcription Factor Family AT1G74250 44.776 9.58e-11 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0084 - - rcu:8265346 143.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0084 10 650753 651085 Sto10g0084 10 650753 651085 ECH
Sto10g0084 10 650753 651085 Sto6g3932 6 43455794 43456297 ECH
Sto10g0084 10 650753 651085 Sto11g1480 11 14051351 14051653 ECH