Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0068 ATGCTTAGGGTTTCGCTTTTCCCTCTGCCTCGCGCCACCGtGTCTGCCTTCTCTGTGCTCAATTGGGATTTCATCATGGATGACGGTGAGCTTGATTTCTCAAACCAGGAAGTATTCTCCAGTACAAACGTGGGGGATCTTCCAAGCTCAATGGACAGTTTTTTTGAAGAGCTTTATAAGGACACACATGCTTGCACTCACACTCACACTTGCAACCCTCCTGGCCCTGATAATTCACATACCCATACTTGTTATCATGTTCACACCAAGATTGTGTCAGCATCTTCTGAAGACAAGGTTGGCACTGATGACAGTGCTGAGTCTGCAGAAAAGAAGTCTAAAAAGCGTCCTCTAGGTAACCGTGAAGCAGTTCGCAAATACCGTGAGAAGAAGAAAGCTCGAGCTGCATCTTTGGAGGATGAAGTCATAAAATTGAGAGCTTTGAATCAACATTTGTTGAGGAAGTTGCAAGGTCAGTCTGCTTTAGAGGCTGAAATTGCAAGGCTAAAGTGCTTGCTTGTGGACATTCGAGGAAGGATTGATGGGGAGATTGGATCATTCCCTTATCAGAAATCAACTAATTCAAACTTGCCAATGCCACACTTGCCTGGTTCATATGTGATAAATCCTTGTAACATGCAGTGTGGTGATCAGGTCTATTGCCTACATCCAGGAGCAGATGGCAAGAATACAGAAGGTGCATCATTTAGTGGGCAAGGATTGAATGGTTGTGAATTTGAAAGCATCCAGTGCCCAGAAAACCAGACTTTGGGGCTCAAGGATCTTTCTCACTGTGGAGTTGGACAGACAATGTCTAATATCAAATCTTCTAtaccaaataaaagaaaagCGAAAAACAAGAAACATGAGGAAGGCATTAAAGAAGGAAAGGAATCACATGATGGCACAGGCTGTGGGGTTCTCGTCACTGAAGGCCGTGGTGTACCGCACCTCCGTGGAGCTGGCACGTGCGAGCTGAGACACGTTAGGGTCATCGGCGCTTCGCACGTAGCCGGCCGGCGCTTTCTTATCGTAGATTCCGGGAGCATAGGGGTGGGCAACGACGTCGTATGGGACATAAGGCCAGAGCTCGGCCTTCTTTCCGGTCCGGTGAGCTATCCGCGCCACCACCTTGGACGGCTCCACGTATCCGATGACGATAAAATGGTATTTTCAAAATGTTCCTTGCACGGCTCTACGGGATTTGCTTTCGAACACCCTTCATTTGAAGCTCATCCCATCAACCACTCACTAGAAGCCGTTGAGAGAAGCAGTAAAGCCGCCGAAAACCATTGGAATAAAGCAGAAGAGGGAAGTCTCtag 1323 0.4679 MLRVSLFPLPRATVSAFSVLNWDFIMDDGELDFSNQEVFSSTNVGDLPSSMDSFFEELYKDTHACTHTHTCNPPGPDNSHTHTCYHVHTKIVSASSEDKVGTDDSAESAEKKSKKRPLGNREAVRKYREKKKARAASLEDEVIKLRALNQHLLRKLQGQSALEAEIARLKCLLVDIRGRIDGEIGSFPYQKSTNSNLPMPHLPGSYVINPCNMQCGDQVYCLHPGADGKNTEGASFSGQGLNGCEFESIQCPENQTLGLKDLSHCGVGQTMSNIKSSIPNKRKAKNKKHEEGIKEGKESHDGTGCGVLVTEGRGVPHLRGAGTCELRHVRVIGASHVAGRRFLIVDSGSIGVGNDVVWDIRPELGLLSGPVSYPRHHLGRLHVSDDDKMVFSKCSLHGSTGFAFEHPSFEAHPINHSLEAVERSSKAAENHWNKAEEGSL 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0068 440 MobiDBLite consensus disorder prediction 100 126 - -
Sto10g0068 440 CDD bZIP 114 167 - -
Sto10g0068 440 PANTHER BASIC LEUCINE ZIPPER 23 26 263 - -
Sto10g0068 440 Coils Coil 121 155 - -
Sto10g0068 440 Gene3D - 99 176 - -
Sto10g0068 440 MobiDBLite consensus disorder prediction 277 300 - -
Sto10g0068 440 MobiDBLite consensus disorder prediction 95 131 - -
Sto10g0068 440 Pfam Basic region leucine zipper 110 165 IPR004827 GO:0003700|GO:0006355
Sto10g0068 440 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 110 157 IPR004827 GO:0003700|GO:0006355
Sto10g0068 440 SUPERFAMILY Leucine zipper domain 112 158 IPR046347 GO:0003700|GO:0006355
Sto10g0068 440 PANTHER CCAAT/ENHANCER BINDING PROTEIN 26 263 - -
Sto10g0068 440 SMART brlzneu 108 175 IPR004827 GO:0003700|GO:0006355
Sto10g0068 440 MobiDBLite consensus disorder prediction 284 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0068 Sto-Chr10 498115 505328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0068 26 283 bZIP Transcription Factor Family AT4G35040 61.069 1.90e-107 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto10g0068 bZIP_2 2.5e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0068 K25785 - twl:120001668 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0068 10 498115 505328 Sto10g0068 10 498115 505328 ECH