Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0060 ATGTCGAAGGAGGTGAGTGAAGAAGGCCAAGCCCATCACCATGGCAAGGACTACGTGGACCCACCACCAGCTCCTCTCATTGACATGGCTGAGCTCAAACTCTGGTCCTTTTACAGAGCACTCATCGCCGAGTTCATCGCTACCCTTCTCTTCCTCTACATCACCGTCGCCACCGTCATCGGCCACAAAAAACAAACCGGCCCATGCGACGGCGTAGGCCTCCTCGGCATCGCCTGGGCCTTCGGTGGACACATCAACCCTGCGGTGACATTTGGGTTGTTCTTGGCACGGAAGGTGTCGCTGATACGAGCCATAGCATACATGGTGGCTCAGTGTCTAGGAGCCATATGTGGCACTGGGTTAGTGAAGGCGTTCATGAAACACGCGTACAACTCGCAAGGTGGTGGTGCTAACACTGTGGCTCTTGGCTACAACAAAGGCACTGCTCTTGGTGCTGAGATTATTGGCACCTTCGTGCTTGTCTACACCGTCTTCTCTGCCACTGACCCCAAGAGAAGCGCACGCGACTCCCATGTCCCTGTGTTGGCTCCATTGCCAATTGGGTTTGCTGTGTTCATGGTTCATTTGGCCACAATTCCCATCACTGGGACTGGGATTAACCCTGCTAGAAGCTTCGGTGCTGCTGTTATCTACAACAATGACAAAGCTTGGGATGACCATTGGATCTTCTGGGTTGGGCCGTTTGTGGGAGCATTGGCAGCAGCGGCTTACCATCAATACATCCTGAGAGCAGCAGCTATCAAGGCTTTGGGATCTTTCCGAAGCAACCCCAGCAACTGA 801 0.5368 MSKEVSEEGQAHHHGKDYVDPPPAPLIDMAELKLWSFYRALIAEFIATLLFLYITVATVIGHKKQTGPCDGVGLLGIAWAFGGHINPAVTFGLFLARKVSLIRAIAYMVAQCLGAICGTGLVKAFMKHAYNSQGGGANTVALGYNKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSNPSN 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0060 266 Pfam Major intrinsic protein 32 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto10g0060 266 Gene3D Glycerol uptake facilitator protein. 24 266 IPR023271 -
Sto10g0060 266 ProSitePatterns MIP family signature. 84 92 IPR022357 -
Sto10g0060 266 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 265 IPR034294 -
Sto10g0060 266 PANTHER BNAC03G65520D PROTEIN 1 265 - -
Sto10g0060 266 TIGRFAM MIP: MIP family channel proteins 43 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto10g0060 266 CDD MIP 39 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto10g0060 266 SUPERFAMILY Aquaporin-like 30 250 IPR023271 -
Sto10g0060 266 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto10g0060 266 PRINTS Major intrinsic protein family signature 103 122 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto10g0060 266 PRINTS Major intrinsic protein family signature 152 170 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto10g0060 266 PRINTS Major intrinsic protein family signature 188 210 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto10g0060 266 PRINTS Major intrinsic protein family signature 228 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0060 Sto-Chr10 468515 469617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0060 1 266 Major Intrinsic Protein MIP AT4G35100 85.409 2.99e-176 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0060 K09872 - thj:104819653 506.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0060 10 468515 469617 Sto10g0060 10 468515 469617 ECH