Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0038 ATGGTGATGGATGAGGATACAGTGCCAGATACGTCGTCACTCCTTCTAACTCCACAACACAGGCAGACGCAGAAGCTTCAGGTGTACTCTGAGGTTCTTCGTCGCCTCAAGAATTCTGATAACGATGAGGCTAAGCTGCCTGACTTCGACAATCAACTTTGGGCTCACTTCAATCGCCTCCCAACAAGGTATGCACTGGATGTTAATGTAGACAGGTCAGCAGATGTTCTGACACATAAGAGGTTACTGAATTTGGCACACGATCCTGCTAACAGGCCTGCAATTGAAGTTCGCCTAGTTCAGGTTTATCCCATATCTGATGGAAATTCAGCTGATTCTGTCCATTCAGATGTACCTGGCGAAGAAGCTTGTCAAAACTGTTCCAAGTACTCAAGCAGACAGAGTATACATCCTCCTCCTGCTTTTGGTTCTTCTCCTAATCTTGGGGCCCTGGCACTTGAAGCAAATGAATCTGAAGAACTAGAGGAGGAAAACTCCATGCATGCCAGTGCTAAATATTTGCAGCCCATGCATGAAATCACCTTCTCTACAGATGACAAGCCGAAGCTTCTTAGCCAGTTAACTTCTTTGCTTGCTGAAATTGGACTGAACATCCAAGAAGCGCATGCTTTTTCCACCACCGATGGTTACTCATTGGATGTGTTTGTTGTTGATGGATGGCCCAATGAGTTGGCAGACTTTGTTGTGAAACAGGAAACGGAGCAGCTTAAAGCAGCTTTGGAAAAAGAAAGGCATGCGTGGTCTATTAAGCAATCAGTACTTAATGTTGGCAAGACTGATCGAGTAGAGGTGAAATGTGAGGGAGATCATTTGACAATACCAAATGATGGGACAGATGTTTGGGAAATAGAACCTAGACATTTGAAGTATGGAAATAAAATTGCCTCTGGGTCATTTGGTGAACTGTTTAGAGGTACATATTGCAGTCAGGAAGTGGCCATCAAAGTTCTCAAGGCTGAGGAATTAAGTTCTGATTGGCAGAAGGAGTTCGCCCAGGAAGTTTATATAATGAGAAAGGTTAGGCATAAGAATGTTGTACAATTTATTGGAGCATGTACCAAGCCACCACATTTGTGCATAATAACAGAATTTATGTCTGGTGGAAGTGTGTATGACTATTTGCATAAGAAGAAGGGTGTTTTTAAATTTCCATCCTTACTGAAAGTAGCAATTGATGTTTCTAAGGGAATGAATTACCTGCACCAGAATAACATTGTCCACAGAGATTTGAAGGCTGCCAATCTTTTGATGGATGAAAATCATGTTGTCAAGGTTGCTGATTTTGGGGTTGCTAGAGTGAAAGATCAATCAGGAGTTATGACAGCAGAAACTGGAACATATCGATGGATGGCTCCTGAGGTTATAGAACACAAGCCATACGATCAGAAGGCTGATGTATTTAGTTTTGGAGTTGTTTTATGGGAATTGCTCACTggaaagCTTCCATATGAGTATTTGACCCCACTACAAGCAGCTATAGGAGTGGTACAAAAGGGCCTACGACCTACCATCCCCAAGAACACCCATCCAAAATTTGTTGAGCTTCTTGAGAGGTGTTGGCAGCAAGAAGCGACGTTAAGACCTGATTTCTCTGAAGTTATTGAGATCCTGCAGCAATTGGCTAAGGAGGTTGGAAATGAAGGAGAGGAGAGGCGGAAGGAGAAATCAGGTGGACTTTTTTCTGCCCTCAGACGAGGCCTTCATTGA 1728 0.43 MVMDEDTVPDTSSLLLTPQHRQTQKLQVYSEVLRRLKNSDNDEAKLPDFDNQLWAHFNRLPTRYALDVNVDRSADVLTHKRLLNLAHDPANRPAIEVRLVQVYPISDGNSADSVHSDVPGEEACQNCSKYSSRQSIHPPPAFGSSPNLGALALEANESEELEEENSMHASAKYLQPMHEITFSTDDKPKLLSQLTSLLAEIGLNIQEAHAFSTTDGYSLDVFVVDGWPNELADFVVKQETEQLKAALEKERHAWSIKQSVLNVGKTDRVEVKCEGDHLTIPNDGTDVWEIEPRHLKYGNKIASGSFGELFRGTYCSQEVAIKVLKAEELSSDWQKEFAQEVYIMRKVRHKNVVQFIGACTKPPHLCIITEFMSGGSVYDYLHKKKGVFKFPSLLKVAIDVSKGMNYLHQNNIVHRDLKAANLLMDENHVVKVADFGVARVKDQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGVVLWELLTGKLPYEYLTPLQAAIGVVQKGLRPTIPKNTHPKFVELLERCWQQEATLRPDFSEVIEILQQLAKEVGNEGEERRKEKSGGLFSALRRGLH 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0038 575 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 18 557 - -
Sto10g0038 575 Pfam Protein tyrosine and serine/threonine kinase 295 544 IPR001245 GO:0004672|GO:0006468
Sto10g0038 575 SUPERFAMILY ACT-like 177 252 IPR045865 -
Sto10g0038 575 PRINTS Tyrosine kinase catalytic domain signature 369 382 IPR001245 GO:0004672|GO:0006468
Sto10g0038 575 PRINTS Tyrosine kinase catalytic domain signature 406 424 IPR001245 GO:0004672|GO:0006468
Sto10g0038 575 PRINTS Tyrosine kinase catalytic domain signature 452 462 IPR001245 GO:0004672|GO:0006468
Sto10g0038 575 PRINTS Tyrosine kinase catalytic domain signature 471 493 IPR001245 GO:0004672|GO:0006468
Sto10g0038 575 PRINTS Tyrosine kinase catalytic domain signature 515 537 IPR001245 GO:0004672|GO:0006468
Sto10g0038 575 PANTHER SERINE/THREONINE-PROTEIN KINASE STY46-LIKE ISOFORM X1 18 557 - -
Sto10g0038 575 SUPERFAMILY Protein kinase-like (PK-like) 285 544 IPR011009 -
Sto10g0038 575 CDD STKc_MAP3K-like 301 544 - -
Sto10g0038 575 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Sto10g0038 575 ProSiteProfiles Protein kinase domain profile. 295 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g0038 575 Gene3D Transferase(Phosphotransferase) domain 1 374 566 - -
Sto10g0038 575 ProSiteProfiles ACT domain profile. 179 263 IPR002912 -
Sto10g0038 575 Gene3D Phosphorylase Kinase; domain 1 285 373 - -
Sto10g0038 575 SMART serkin_6 295 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0038 Sto-Chr10 339824 345838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0038 19 573 MAP Kinase Kinase Kinase AT4G35780 63.685 0.0 711
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Sto10g0038 PK_Tyr_Ser-Thr 7e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0038 - - gmx:100805180 851.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0038 10 339824 345838 Sto10g0038 10 339824 345838 ECH