Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0033 ttggtgcAGATAAGATGCAACAACCCAAGTTTGTGTACTAAAGCTGGAACCAGGGTGCTTGTCACTGAcctcaacaacaacaatcatacTGATTTTGTGCTCAGTACCAGAGCTTTCGCCGCCATGGCTCACAAGGGTATGCTTCAACAAATTTTGAAGCTCCGAATTGTTGACATCCAATATAAGAgAGTAGCATGTGAATATAAAAAGCAGAACTTGGCAGTACGGGTGGAAGAATCGAGCAAGAAACCGGATTACCTAGCTATCAAATTTTTGTATCAAGGTGGACAAACAGAGATAGTAGGCGTGGATGTAGCTCAGGTTGCATCTCCAAACTGGAATTATTTGAGCAGAAAGAATGGGGCAATATGGGAGACAGATAGAGTACCAGCAGGAGCATTGCAGTTGAGAATGGTGATAACGAGTGGGTTTGATGGAAAATGGATATGGGCCCCCAATGTGCTACCTGCTGATTGGAAGCCCGGCCATGTTTACGACACGGGCCTTCAAATCACTGACATCGCCAAAGAGGGTTGCTCTCCCTGTGACGACGCCACCTGGTCATGA 567 0.4374 LVQIRCNNPSLCTKAGTRVLVTDLNNNNHTDFVLSTRAFAAMAHKGMLQQILKLRIVDIQYKRVACEYKKQNLAVRVEESSKKPDYLAIKFLYQGGQTEIVGVDVAQVASPNWNYLSRKNGAIWETDRVPAGALQLRMVITSGFDGKWIWAPNVLPADWKPGHVYDTGLQITDIAKEGCSPCDDATWS 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0033 188 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 1 71 IPR007112 -
Sto10g0033 188 SUPERFAMILY Barwin-like endoglucanases 2 69 IPR036908 -
Sto10g0033 188 PANTHER EXPANSIN-LIKE A1-RELATED 3 184 - -
Sto10g0033 188 Pfam Expansin C-terminal domain 74 156 IPR007117 -
Sto10g0033 188 PANTHER EXPANSIN-B3 3 184 - -
Sto10g0033 188 PRINTS Expansin/Lol pI family signature 54 70 IPR007118 GO:0005576
Sto10g0033 188 PRINTS Expansin/Lol pI family signature 153 167 IPR007118 GO:0005576
Sto10g0033 188 PRINTS Expansin/Lol pI family signature 113 127 IPR007118 GO:0005576
Sto10g0033 188 Gene3D - 68 172 IPR036749 -
Sto10g0033 188 SUPERFAMILY PHL pollen allergen 72 166 IPR036749 -
Sto10g0033 188 Gene3D - 1 67 IPR036908 -
Sto10g0033 188 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 85 167 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0033 Sto-Chr10 293784 294943 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0033 3 188 Expansin Gene Family AT3G45970 58.730 1.90e-84 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0033 - - gmx:100819849 309.686