Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0019 ATGGATGGCTCCAAGGAAAACCATATGGGTCCGCTGTTACCCTCCTCAAATCTTCAAGGCGGTTCAAGAATGGAGGGCGTCAAGCATATGAAGGAGATGGGACAGACTAATCGGAGGGCTCTGAGCAATATCAATCAGAATATTATGGAGGCTATTCATAGGCCCTGTGTGATCAATAGAGCAGATCTATCCAGaaGATGTACAGCACAGACGGTCCAGCACTGCCCTGAAGAAACTGAAAAACTTCCCAGTCAGCAGTTGGATTGTACAATAATAGACGTTGAAGAATACGAGGAGAATGCAGTTCCAGAGTTTGTGAGGCACACAGAAGCAATGCTAGACGAAATTGACAGATTAgaggaagtggaaatggaagacGTGGAGGAGCCTGTTATGGACATCGACACTTGTGATACCAAGAATCCACTTGCGGTTGTTGAGTACGTAGATGACATCTacgaattttataaaaaaattgagAATTCGAGCTGCGTCTCTCCAGATTACATGACTGCTCAGTTTGACATCAACGAGAAGATGAGGGCTATCCTCATTGACTGGCTTATTGAGGTTCACTACAAATTTGAGCTTATGGAGGAGACCTTGTTCCTTACTGTCAATCTTATAGACAGGTTCTTAGAGCGTCGGACGGTGATCAGAAAGAAGCTTCAATTGGTTGGTGTAACAGCCATGCTGATAGCTTGTAAATATGAGGAGGTTTCTGTGCCCACTGTTGAGGATTTTATTCTGATAACTGACAAGGCTTACAAAAGGGAAGAAGTTCTAAGTATGGAGAAATTAATGATGAACACTTTACAATTCAACTTGTCTGTGCCTACTCCTTACGTGTTCATGAGGAGATTTCTTAAGGCAGCTCGATCTGACAAAAAGCTGGAGCTCTTGTCCTTCTTCATAATGGAGCTTTGCCTGGTGGAATACAAAATGCTCAAGTTTTCACCTTCTTTGCTAGCTGCTGCAGCTATTTACTCAGCTCAGTGTGGTCTTTACCAGTTTAAGCAGTGGACAAAGACCAGCGAGTGGTATACTAATTACTCGGAAGGCCAGCTTATAGAATGCTCAAGAATGATGGTTAGCTTCCATCAGAAGGCTGGAACAGGAAAACTCACAGGAGTATATAGGAAGTACAGTACGTGCAAGTATGGCTATGCCGCCAGAATGGAACCACCCCTCTTCCTACTGGAACACTAG 1209 0.4251 MDGSKENHMGPLLPSSNLQGGSRMEGVKHMKEMGQTNRRALSNINQNIMEAIHRPCVINRADLSRRCTAQTVQHCPEETEKLPSQQLDCTIIDVEEYEENAVPEFVRHTEAMLDEIDRLEEVEMEDVEEPVMDIDTCDTKNPLAVVEYVDDIYEFYKKIENSSCVSPDYMTAQFDINEKMRAILIDWLIEVHYKFELMEETLFLTVNLIDRFLERRTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYKREEVLSMEKLMMNTLQFNLSVPTPYVFMRRFLKAARSDKKLELLSFFIMELCLVEYKMLKFSPSLLAAAAIYSAQCGLYQFKQWTKTSEWYTNYSEGQLIECSRMMVSFHQKAGTGKLTGVYRKYSTCKYGYAARMEPPLFLLEH 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0019 402 ProSitePatterns Cyclins signature. 181 212 IPR006671 -
Sto10g0019 402 SMART Cyclin_C_2 279 396 IPR004367 -
Sto10g0019 402 CDD CYCLIN 277 364 IPR013763 -
Sto10g0019 402 Pfam Cyclin, C-terminal domain 279 395 IPR004367 -
Sto10g0019 402 PIRSF Cyclin_A_B_D_E 28 402 IPR039361 -
Sto10g0019 402 PIRSF Cyclin_A_B_D_E 12 90 IPR039361 -
Sto10g0019 402 SUPERFAMILY Cyclin-like 140 276 IPR036915 -
Sto10g0019 402 Pfam Cyclin, N-terminal domain 151 277 IPR006671 -
Sto10g0019 402 SMART cyclin_7 283 365 IPR013763 -
Sto10g0019 402 SMART cyclin_7 186 270 IPR013763 -
Sto10g0019 402 CDD CYCLIN 180 269 IPR013763 -
Sto10g0019 402 Gene3D - 165 277 - -
Sto10g0019 402 Gene3D - 151 391 - -
Sto10g0019 402 PANTHER CYCLIN-B2-3-RELATED 32 397 - -
Sto10g0019 402 SUPERFAMILY Cyclin-like 278 396 IPR036915 -
Sto10g0019 402 MobiDBLite consensus disorder prediction 1 22 - -
Sto10g0019 402 PANTHER CYCLINS 32 397 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0019 Sto-Chr10 220361 222420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0019 4 400 Core Cell Cycle Gene Families AT1G20610 58.178 3.61e-170 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0019 K21777 - gmx:100819848 569.696