Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1993 ATGtctccctctccctctgctcACTCAGctcttaaatataagaaaatccAAGTTTGCGTGACGGTGATCAGAACCAAAATGCCCAATCTCAGAAGTCCTAGATTTAACCAATTTTTGGTGTCTCTCTTGGTTACGTTGATCCAAATCCAAACCAAGGTGCGATGTTACCAGTACAAAGTTGGAGATCTAGATGCCTGGGGGATACCCACTTCAGCAAATTCACAAGTCTACGACAAATGGTCCAAATATGACAACCTCAAGATCGGGGATTCGCTCCTGTTTCTATACCCACCAAGTCAAGATTCAGTGATTCAAGTAACAGCGGAATCCTACAAGAGCTGCAACCTTAAAGATCCTATTTTGTACATGAACAACGGCAACTCGTTGTTTAACATTACATCAGAGGGGGACTTTTACTTCACCAGTGGAGAGGCTGGCCATTGCCAAAAGAATCAAAAGCTTCATATAATTGTGGGGGTTGGGGGAAACATGAACGCACTTGCTCCAACTTCATTGCCTGAATACGCACCCTCTTACCCAACTGTATTTGGCAACATTCCCATGTCTCCTTCTTCCTCACCTCACCTAACTTCAAATTTTTCGCTTATAATTATTGCATTCTTCCTATGTGCACTGCTCTCTAGTCAAATGTGA 654 0.4037 MSPSPSAHSALKYKKIQVCVTVIRTKMPNLRSPRFNQFLVSLLVTLIQIQTKVRCYQYKVGDLDAWGIPTSANSQVYDKWSKYDNLKIGDSLLFLYPPSQDSVIQVTAESYKSCNLKDPILYMNNGNSLFNITSEGDFYFTSGEAGHCQKNQKLHIIVGVGGNMNALAPTSLPEYAPSYPTVFGNIPMSPSSSPHLTSNFSLIIIAFFLCALLSSQM 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1993 217 PANTHER BLUE COPPER PROTEIN 35 183 IPR039391 GO:0009055
Ssu9g1993 217 CDD OsENODL1_like 56 158 IPR041846 -
Ssu9g1993 217 PANTHER MAVICYANIN 35 183 - -
Ssu9g1993 217 SUPERFAMILY Cupredoxins 55 158 IPR008972 -
Ssu9g1993 217 Gene3D - 56 167 IPR008972 -
Ssu9g1993 217 ProSiteProfiles Phytocyanin domain profile. 56 160 IPR003245 GO:0009055
Ssu9g1993 217 Pfam Plastocyanin-like domain 74 151 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1993 Ssu-Chr9 57984787 57985546 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1993 39 188 Phytocyanin Superfamily AT1G64640 56.954 3.17e-53 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1993 - - gmx:100783186 329.331