Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1988 ATGACTGAGAATAACAAATTTAGGTTAAGAGGGGAGAAAAATGCTGAAAGTACAATTTCACTTACACTGCGAATTGCAGATGCATGTGGTGGGGCAAGGAATATCCATTTTCCATTCTATATTGATTCTGATACAGCAATTTCCATTGCTGAGGAGATGGTGGAACATCTGGAACTCACAAATGAGGATGTATCTGTCATTGCAGAGCTAATTCACAACATGATTGTTAAGTTTGTACCCAGCTGGAAACCCTTATGTGAGAACCTCTCATCTGGAACAGATCATTTTACAAGTCTTCTTTAG 303 0.3861 MTENNKFRLRGEKNAESTISLTLRIADACGGARNIHFPFYIDSDTAISIAEEMVEHLELTNEDVSVIAELIHNMIVKFVPSWKPLCENLSSGTDHFTSLL 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1988 100 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 19 75 IPR024678 GO:0004674|GO:0005524
Ssu9g1988 100 Gene3D - 17 96 - -
Ssu9g1988 100 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 89 - -
Ssu9g1988 100 PANTHER WNK KINASE 4 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1988 Ssu-Chr9 57948979 57949359 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1988 5 83 MAP Kinase Kinase Kinase AT3G18750 53.165 6.05e-23 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1988 K08867 - gmx:100783717 164.081