Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1984 ATGACCACTTCCCACGTTCTCGAGAAAGATCCAACCTCCAGATACGCGCGGTACGATGAAATGTTGGGGAAAGGAGCCTTCAAGACTGTATACAAAGCCTTTGACGAAGTGGACGGAATCGAAGTTGCATGGAATAGGATCAGCGTTGAGGATGCTGTGCAGACGCCGCAACAGTTGGGAAAGTTGTACTCTGAGGTTCACTTGCTCAAGTCCTTGAAACACGACAATGTCATCAAGTTGTATAATTCTTGGGTCGATGACACTACCGGCACCATCAACATGATCACTGAGTTGTTCACCTCCGGGAGTTTAAGGCAGTACCGGAAGAAGCATAAGAATGTGGATATGAAAGCAATCAAGAACTGGGCGCGGCAGATTCTCCGCGGCTTGTGCTTTCTGCACGGTCACAGTCCTCCTATTATTCATAGGGACCTGAAATGTgataatatttttgtcaatGGGAATAATGGACTGGTTAAGATTGGAGATCTTGGATTGGCAATTGTCATGCAGCAGCCGATTGCCCGGAGTGTCATTGGTACACCAGAGTTCATGGCCCCAGAGCTTTATGAGGAGGAATACAATGAACTTGTTGACATATATTCCTTTGGCATGTGTATCTTAGAAATGATCACCTGCGAGTACCCCTATAGTGAGTGTAAAAATCCAGCTCAGATATATAAGAAAGTTACCTCTgGTATAAAGCCTGCTGCTCTTGCTAAAGTAAATGATCCTGAAGTGAAGCAATTCATAGAGAAGTGTCTAGTTCCAGCATCTATGAGATTGTCAGCATCTGAACTACTGAAAGACCCATTCCTTGCAACTGAAAACATAAAAGAGATCAATCATGATACACTGCAGCTGCCTAATCCTCACACCAAATTGGTGAATCCACCTACGTGCGAACCTCATCCCATGGAGATAGATTCCAACTCCAGGCGTACTTCACCTGGCTCCTCTGTGGGAAAAATTGAAGAAACTTCTcaagtttcaatttttgatcTTGTGAGGATGACTGAGAATAACAAATTTAGGTTAAGAGGGGAGAAAAATGCTGAAAGTACAATTTCACTTACACTGCGAATTGCAGATGCATGTGGTGGGGCAAGGAATATCCATTTTCCATTCTATATTGATTCTGATACAGCAATTTCCATTGCTGAGGAGATGGTGGAACATCTGGAACTCACAAATGAGGATGTATCTGTCATTGCAGAGCTAATTCACAACATGATTGTTAAGTTTGTACCCAGCTGGAAACCCTTATGTGAGAACCTCTCATCTGGAACAGATCATTTTTACAAGTCTTCTTTAGAAGTTCAGAATGGTGAACAATTAAACTGCCATTGGCCATTACGATCAAGTGATTACGATATGAAGACAATCTATGAGGATTTAGTTCACTCTCGGCCTGTGGATGGGGATGATCAGGAGAAACAAGAATCTGTTATGTCGGATATATCAGTGGAGTGTGGTATTGCAATTGCCTCAGATTCTAAAGGTGTAGACcctgacatttttatttttgatgaatgCTGGGAGGTATTCGACGGATTCAATTCCAATTCAGATGTCGGGTTTTGTAGGCAAGAGGATGAACACAAGAATCAATCAGAGAACTCAGCAGgctctttaattaattcatgttgCAGCCCATCCAAAAACTTTGACATACCAAGCACATGTTCTCTTACTCTAGTTGACAAAGATCATTCAAACGAGCTGCAGTTGGAGCTTGAAGCAATAGAAACACAATATCAACAATGCTTTCGTGAGCTTGTGAAGATGAGGGAGGAAGCCATGGAAAATGCAAAAAGGAGATGGATAACAAGGAAGAAGATACCAGTTATGTGA 1854 0.4099 MTTSHVLEKDPTSRYARYDEMLGKGAFKTVYKAFDEVDGIEVAWNRISVEDAVQTPQQLGKLYSEVHLLKSLKHDNVIKLYNSWVDDTTGTINMITELFTSGSLRQYRKKHKNVDMKAIKNWARQILRGLCFLHGHSPPIIHRDLKCDNIFVNGNNGLVKIGDLGLAIVMQQPIARSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMITCEYPYSECKNPAQIYKKVTSGIKPAALAKVNDPEVKQFIEKCLVPASMRLSASELLKDPFLATENIKEINHDTLQLPNPHTKLVNPPTCEPHPMEIDSNSRRTSPGSSVGKIEETSQVSIFDLVRMTENNKFRLRGEKNAESTISLTLRIADACGGARNIHFPFYIDSDTAISIAEEMVEHLELTNEDVSVIAELIHNMIVKFVPSWKPLCENLSSGTDHFYKSSLEVQNGEQLNCHWPLRSSDYDMKTIYEDLVHSRPVDGDDQEKQESVMSDISVECGIAIASDSKGVDPDIFIFDECWEVFDGFNSNSDVGFCRQEDEHKNQSENSAGSLINSCCSPSKNFDIPSTCSLTLVDKDHSNELQLELEAIETQYQQCFRELVKMREEAMENAKRRWITRKKIPVM 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1984 617 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 612 - -
Ssu9g1984 617 Gene3D - 354 436 - -
Ssu9g1984 617 Gene3D Transferase(Phosphotransferase) domain 1 99 281 - -
Ssu9g1984 617 SUPERFAMILY Protein kinase-like (PK-like) 19 316 IPR011009 -
Ssu9g1984 617 MobiDBLite consensus disorder prediction 302 321 - -
Ssu9g1984 617 SMART serkin_6 16 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g1984 617 Gene3D Phosphorylase Kinase; domain 1 2 97 - -
Ssu9g1984 617 PANTHER WNK KINASE 4 612 - -
Ssu9g1984 617 ProSiteProfiles Protein kinase domain profile. 16 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g1984 617 CDD STKc_WNK 14 273 - -
Ssu9g1984 617 Pfam Protein kinase domain 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g1984 617 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 356 412 IPR024678 GO:0004674|GO:0005524
Ssu9g1984 617 Coils Coil 572 599 - -
Ssu9g1984 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1984 Ssu-Chr9 57908897 57911761 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1984 1 616 MAP Kinase Kinase Kinase AT5G41990 51.461 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Ssu9g1984 Pkinase 3.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1984 K08867 - gmx:100783717 1067.76