Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu9g1979 | ATGACGGAAGTGGCGAGATCAGTGGTGCACGACGTTTTGGGACAAAGAGTCGTCGACGTGGACCAGCCAATCGTGGATTACATCGTCAACGTCCTCGCCGACGATGACTTCGATTTCGGCCCCAACGGCGAAGGCGCCTTCGAAGCCCTCGGCGAGCTCCTCGTCGCCGCCGGATGCGTCGACGATTTCTCCGAGTGCCGCTCCGTGTGCAGCACGCTGTGCGACAAGTTCGGGAAGCACGGTTTGGCGAAGGCGAAGCCCACGGTGCGAAGCCTCGCGGCGCCGTTTCGAATGAACGACGGAATGGAAGACGTCCAAGCTCCCAAGAAGAAGCCCGAGCCCATCGACGGCCCTCTGCTTTCGGAACGCGACCGTTTAAAGCTCGAGAGGCGAAAGCGCAAGGAGGAGCGCCAGCGAGAGGCACAATACCAAATGCACTTGGCGGAGATGGAGGCTGCACGGGCCGGGATGCCGGTGGCGTGCGTGAGGCATGACAGCAGTGGGGGACCAAACGTGAAGGACATTCACATGGAGAATTTCAATATCTCTGTTGGTGGGCGTGATCTCATTGTGGATGGTTCTGTCACACTTTCTTTTGGGAGGCATTATGGTTTGGTAGGAAGGAACGGGACGGGGAAAACCACTTTCCTAAGACACATGGCAATGCATGCCATTGATGGTGTTCCGAGGAAGTGTCAGATACTGCATGTGGAGCAAGAGGTGACAGGTGATGATACGACGGCCTTGCAGTGTGTCCTCAACTCTGACATTGAGAGGACTCAGCTTCTCGACGAAGAAGCTCAGTTACTTGCCAAACAGAGGGAATTTGAGGACAAAATTGAAAAGGGTGATTCAAACGGAGTGGTCGATAGAGATGGCATTTCACAAAGGCTTGCAGAAATATATAAGAGGCTTGAACTCATTGATGCTGATTCTGCAGAGGCACGGGCAGCATCGATACTAGCAGGTTTGAGTTTCTCACCTGAGATGCAGAAGAAGGCAACAAAAACATTTTCTGGAGGATGGCGGATGCGAATAGCTCTTGCTCGTGCACTGTTTATAGAGCCTGATATGTTGCTTCTTGATGAGCCTACGAATCATCTTGATCTTCATGCTGTCTTATGGCTTGAATTGTACTTGGTTAAATGGCCAAAAACATTTATTGTTGTTTCTCATGCTAGGGAATTTTTAAACACGGTGGTTACTGATATAATTCACTTACAAAACCAAAAGCTGACTACTTATAAAGGGAATTATGATACTTTTGAGAAGACTCgagaagaacaaattaaaaaccaGCAAAAAGCATTAGAGGCAAGCGAACGTGCAAGATCTCATATGCAGACCTTCATTGACAAGTTCCGATATAATGCAAAGAGGGCATCACTTGTTCAATCTAGAATCAAGgCTTTGGAGCGAATGGGTCATGTAGATGAAATTGTTAATGATCCTGACTACAAATTTGAGTTCCCCACTCCAGATGATAGACCTGGCCCACCAATAATAAGTTTCAGTGATGCATCATTTGGTTATCCTGGGGGGCCCATTCTGTTTAAGAATTTGAACTTTGGGATTGATCTCGACAGTCGTATTGCAATGGTTGGACCAAATGGCATTGGCAAATCAACTATACTTAAGTTAATTGCTGGGGAACTACAGCCCAGTTCTGGGACTGTCTTCCGTTCTGCTAAGGTTCGTATAGCAGTGTTCAGTCAGCACCATGTTGATGGACTGGACTTATCCTCAAATCCTCTTCTGTATATGATGCGCTGCTATCCTGGAGTTCCAGAACAGAAGCTTCGAGCTCACTTAGGTTCTTTTGGTGTAACTGGAAATCTTGCACTGCAGCCAATGTATACTTTGTCAGGTGGTCAGAAAAGCAGGGTTGCCTTTGCAAAGATAACTTTTAAGAAGCCACACATAATATTGCTTGATGAGCCGTCCAATCATCTGGATTTGGATGCTGTTGAGGCGCTTATTCAAGGTCTTGTGCTGTTCCAAGGAGGCATTCTCATGGTGAGTCACGATGAGCATCTCATCTCTGGAAGCGTGGAGGAACTATGGGTTGTATCCGAAGGAAGAGTGACACCATTCCATGGCACATTCCAAGATTATAAGAAGATACTCCAATCATCCTAG | 2139 | 0.4741 | MTEVARSVVHDVLGQRVVDVDQPIVDYIVNVLADDDFDFGPNGEGAFEALGELLVAAGCVDDFSECRSVCSTLCDKFGKHGLAKAKPTVRSLAAPFRMNDGMEDVQAPKKKPEPIDGPLLSERDRLKLERRKRKEERQREAQYQMHLAEMEAARAGMPVACVRHDSSGGPNVKDIHMENFNISVGGRDLIVDGSVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGVPRKCQILHVEQEVTGDDTTALQCVLNSDIERTQLLDEEAQLLAKQREFEDKIEKGDSNGVVDRDGISQRLAEIYKRLELIDADSAEARAASILAGLSFSPEMQKKATKTFSGGWRMRIALARALFIEPDMLLLDEPTNHLDLHAVLWLELYLVKWPKTFIVVSHAREFLNTVVTDIIHLQNQKLTTYKGNYDTFEKTREEQIKNQQKALEASERARSHMQTFIDKFRYNAKRASLVQSRIKALERMGHVDEIVNDPDYKFEFPTPDDRPGPPIISFSDASFGYPGGPILFKNLNFGIDLDSRIAMVGPNGIGKSTILKLIAGELQPSSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCYPGVPEQKLRAHLGSFGVTGNLALQPMYTLSGGQKSRVAFAKITFKKPHIILLDEPSNHLDLDAVEALIQGLVLFQGGILMVSHDEHLISGSVEELWVVSEGRVTPFHGTFQDYKKILQSS | 712 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu9g1979 | 712 | ProSitePatterns | ABC transporters family signature. | 621 | 635 | IPR017871 | GO:0005524 | |
Ssu9g1979 | 712 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 175 | 432 | IPR027417 | - | |
Ssu9g1979 | 712 | CDD | ABCF_EF-3 | 175 | 411 | - | - | |
Ssu9g1979 | 712 | SMART | AAA_5 | 527 | 694 | IPR003593 | - | |
Ssu9g1979 | 712 | SMART | AAA_5 | 199 | 411 | IPR003593 | - | |
Ssu9g1979 | 712 | Pfam | ABC transporter | 405 | 485 | IPR032781 | - | |
Ssu9g1979 | 712 | Pfam | ABC transporter | 194 | 366 | IPR003439 | GO:0005524 | |
Ssu9g1979 | 712 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 175 | 434 | IPR003439 | GO:0005524 | |
Ssu9g1979 | 712 | Gene3D | - | 125 | 447 | IPR027417 | - | |
Ssu9g1979 | 712 | Gene3D | - | 464 | 712 | IPR027417 | - | |
Ssu9g1979 | 712 | Pfam | ABC transporter | 519 | 649 | IPR003439 | GO:0005524 | |
Ssu9g1979 | 712 | PANTHER | NON-TRANSPORTER ABC PROTEIN | 121 | 711 | - | - | |
Ssu9g1979 | 712 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 502 | 711 | IPR003439 | GO:0005524 | |
Ssu9g1979 | 712 | ProSitePatterns | ABC transporters family signature. | 338 | 352 | IPR017871 | GO:0005524 | |
Ssu9g1979 | 712 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 483 | 704 | IPR027417 | - | |
Ssu9g1979 | 712 | CDD | ABCF_EF-3 | 502 | 694 | - | - | |
Ssu9g1979 | 712 | PANTHER | ATP-BINDING TRANSPORT PROTEIN-RELATED | 121 | 711 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu9g1979 | Ssu-Chr9 | 57830664 | 57844118 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu9g1979 | 458 | 663 | Calmodulin-binding Proteins | AT2G36910 | 26.337 | 2.53e-10 | 62.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu9g1979 | K06158 | - | gmx:547980 | 1328.54 |