Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1961 ATGGATCACTCCTCTATTCTTTTGTTGCCCCACCTTCAACTTCAGGCCTTGTGGTCttctttgattattattAAATTGAGCTTCAGTACCACGTACTTTGGGGAGGGTAAGAAGGATGGAGGGCCTGGTTGTGAGGAAGTGGAACATCTTGATGCCCTTTTCACAATGCTTAAGTACGTTTATGACTTTAGTGTTTCTGACTATGTCCCTTGCTTGAGGGGACTTAACTTGGATGGTCATGAGGGCAAGGTGAAGAAGGCCATGGAAATTGTGAACAAGTATCATGATCCCATCATTGAGCAGCGTATCAAAGAATGGAATGATGGGTCCAAGATTGATGAAGAGGATTTCCTTGATATTCTCATCTCACTCAAAGATGCCAACAATAACCCGATATTGACAACACAGGAAATCAAGGCGCAAATCATAGAATTGATGATGGCGGCAGTGGATAACCCATCAAATGCGATTGAATGGGGTCTTGCAGAGATGATAAACCAACCCGAGTTGCTTCAACGCGCCACAGAAGAATTGGACAAGGTAGTGGGGAAAGAGAGACTGGTCCATGAATCAGACATCCCAAAGCTTAACTACATAAAAGCATGTGCAAGAGAAGCTTTTCGCCTTCACCCCGTTGTGCCTTTCAATGTTCCTCACGTTTCTGTGAAAGACACAACAGTGGGCAACTACCTAATCCCAAAAGGGAGCCATGTGCTGTTAAGTAGACAAGAGCTTGGACGAAACCCAAAAGTTTGGAGTGACGAGCCTCATAAGTTCAAGCCAGAACGTCACCTTAAGAGTGAGGTGGTTTTGACGGAGTCAGATTTGAAGTTCATTTCATTCAGCACGGGACGACGTGGTTGTCCAGGAATCATGCTTGGTACCACAATGACTGTGATGCTATTTGCTAGGTTGCTTCATGCCTTCACTTGGACTGCACCACCCAATCTGTCACACATCAACCTTGCTGAGAGTAATCATGATATATTTCTCGCTCACCCACTTGTGGCACTAGCAAAACCAAGATTAGCACCAGAGCTTTATGCTATATGA 1053 0.4435 MDHSSILLLPHLQLQALWSSLIIIKLSFSTTYFGEGKKDGGPGCEEVEHLDALFTMLKYVYDFSVSDYVPCLRGLNLDGHEGKVKKAMEIVNKYHDPIIEQRIKEWNDGSKIDEEDFLDILISLKDANNNPILTTQEIKAQIIELMMAAVDNPSNAIEWGLAEMINQPELLQRATEELDKVVGKERLVHESDIPKLNYIKACAREAFRLHPVVPFNVPHVSVKDTTVGNYLIPKGSHVLLSRQELGRNPKVWSDEPHKFKPERHLKSEVVLTESDLKFISFSTGRRGCPGIMLGTTMTVMLFARLLHAFTWTAPPNLSHINLAESNHDIFLAHPLVALAKPRLAPELYAI 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1961 350 SUPERFAMILY Cytochrome P450 43 342 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1961 350 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 281 290 IPR017972 GO:0005506|GO:0016705
Ssu9g1961 350 Gene3D Cytochrome P450 13 330 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1961 350 PRINTS E-class P450 group I signature 137 154 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1961 350 PRINTS E-class P450 group I signature 200 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1961 350 PRINTS E-class P450 group I signature 157 183 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1961 350 PRINTS E-class P450 group I signature 242 266 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1961 350 PRINTS E-class P450 group I signature 278 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1961 350 PRINTS E-class P450 group I signature 288 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1961 350 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 18 348 - -
Ssu9g1961 350 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 18 348 - -
Ssu9g1961 350 Pfam Cytochrome P450 61 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1961 Ssu-Chr9 57504327 57506323 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1961 18 348 Cytochrome P450 AT5G05260 56.287 4.64e-141 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1961 - K14984 gmx:100786887 580.867