Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1951 ATGGAtgggtttaagagaaataatcaACTCTTGATTTTTTCAATCTTGATCTTCCTCGTTGTTCTCCCAACTCTAGTTATTGCAGAATGCACATGTGACAAAGAAGACGAAGAACGTGACAAGGCCAAAGCCCTAAGGTACAAAATAGCAGCTTTAGTGTCAATACTAGTTGCTAGCGCATTTGGGGTGTGTATCCCACTCCTTGGCAAAGTTATACCCGCTCTGAGTCCTGAGAAGGATATTTTCTTTATCATCAAAGCCTTTGCAGCGGGTGTGATATTGTCCACTGGATTCATTCATATTCTCCCTGATGCTTTTGAAAACCTCACCTCACCTTGTATAAAAGAGCATCCATGGGGTGACTTTCCCTTCACTGGATTTGTGGCCATGTGCACCGCTATGGGGACCCTTATGGTTGACACTTATGCCActgcttattttaaaaagcacCATTCCAAAGGAGCACAAGTTGAGGCCACAGATGTGGAGAAGGAATCAGGGCATGAAGGTCATGTGCATCTTCACACACATGCAACACATGGTCATGCACACGGGCATGCTTCCTCTGATGAGTCCTCAGAACTTCTTCGTCATCGGGTCATATCACAGGTGTTGGAGCTGGGAATTATTGTTCATTCTGTCATCATTGGAATTTCTCTGGGAGCTTCAGAGAGTCCCAAAACAATAAGACCGCTGGTAGCTGCGTTGACTTTTCATCAATTCTTTGAGGGAATGGGACTTGGAAGTTGTATAACTCAGGCAAATTTCAAGAGTTCGTCTGTTACAATAATGGGGTTGTTCTTCGCTTTAACCACTCCAGTGGGGATTGGAATCGGCATAGGGATCACAAATGTTTATGATGAAAATAGTCCAACAGCGCTTATTGTGGAAGGAATCTTTGATGCAGCATCATCtgggattttaatttatatggcaCTTGTAGATCTTCTAGCAGCTGATTTTATGAATCCAAGAATGCAAAAAAGTGGTACGCTCCGATTAGGATCCAATCTCTCTCTTCTGCTTGGAGCTGGTTGCATGTCTGTTTTGGCTAAATGGGCTTAG 1065 0.415 MDGFKRNNQLLIFSILIFLVVLPTLVIAECTCDKEDEERDKAKALRYKIAALVSILVASAFGVCIPLLGKVIPALSPEKDIFFIIKAFAAGVILSTGFIHILPDAFENLTSPCIKEHPWGDFPFTGFVAMCTAMGTLMVDTYATAYFKKHHSKGAQVEATDVEKESGHEGHVHLHTHATHGHAHGHASSDESSELLRHRVISQVLELGIIVHSVIIGISLGASESPKTIRPLVAALTFHQFFEGMGLGSCITQANFKSSSVTIMGLFFALTTPVGIGIGIGITNVYDENSPTALIVEGIFDAASSGILIYMALVDLLAADFMNPRMQKSGTLRLGSNLSLLLGAGCMSVLAKWA 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1951 354 PANTHER ZINC/IRON TRANSPORTER 19 354 - -
Ssu9g1951 354 TIGRFAM zip: ZIP zinc/iron transport family 30 354 IPR004698 GO:0005385|GO:0016021|GO:0071577
Ssu9g1951 354 PANTHER ZINC TRANSPORTER 1 19 354 - -
Ssu9g1951 354 Pfam ZIP Zinc transporter 47 351 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1951 Ssu-Chr9 57324171 57330192 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1951 12 354 Inorganic Solute Cotransporters AT3G12750 55.429 6.66e-135 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1951 K14709 - gmx:547695 542.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1951 9 57324171 57330192 Ssu6g3710 6 81152924 81155670 PCT