Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1950 atgaattttgatttaataagaaGGACCAAAGTCATAGTTGAACACACCAAGCCCAATGCACGGAgggAATGCACATGTGACAAGGAAGGCGAAGAACGTGACAAAGCCAAAGCCCTAAGGTACAAAATAGCAACTTTAGTGTCAATACTAGTTGCTAGTGCATTTGGCGTGTGTATCCCACTACTTGGCAAAGTTATACCCACTTTGAGTCCGgagaaagatattttctttatcaTCAAGGCCTTTGCTGCGGGTGTGATATTGGCCACTGGTTTCACTCATATTCTCCCTGATGGTTTCGAAAACCTCACCTCACCTTGTATAAATGAGCATCCATGTGGTGACTTTTCCTTCACTGGATTTGTGGCTATGTGCACTGCTATGGGGATCCTTATGGTTGACTCTTATGCCACTGCTTATTTTAAAAGGCACCATTCCAAGGGAGCACAAGTTGAGGCCATGAACTACGTGGAGAAGGAATCAGGACATGTGCATCTTCACACACATGCAACACATGCTCATGCACACGGTCATGTTCCTTCCGATGAGTCCCCAGAACTTCTTCGTCATCTGGTCATATCACAGGTGTCGGAGCAGGGAATTACTGTTCATTCTGTCGTGATTGGAATTTCTCTGGGAGCTTCAGAGAGTCCCAAAATAATCAGACGGCTGGTAGCTGCTTTGACTTTTCATCAATTCTTTGAGGGCATGGGACTTGGAAGAAAATTTCAAGAGTATGTCTGTTACAACAATGGGGTTGTTCTTCACGTTAACCACACTCCAGTGGAGATTGGAATCGGCATACGGATCGCCAGTATTTATGATGAAAATAGTCCAACTGAGCTTATTGCGGAAAGAATCTTTGATAATACAGCATCAGCTGGGATCTTAATTTATATGGCACTTGTAGATCTTCTAGCTGCTGATTTTAGAAATCCAAGAATGCAAAAAAGTGGTAGGCACGGATTAGGATTCAATCTCTCTCCTGCTTGGAGCTGGTTGCGTGTCTGTTTTGGCTAA 1020 0.4235 MNFDLIRRTKVIVEHTKPNARRECTCDKEGEERDKAKALRYKIATLVSILVASAFGVCIPLLGKVIPTLSPEKDIFFIIKAFAAGVILATGFTHILPDGFENLTSPCINEHPCGDFSFTGFVAMCTAMGILMVDSYATAYFKRHHSKGAQVEAMNYVEKESGHVHLHTHATHAHAHGHVPSDESPELLRHLVISQVSEQGITVHSVVIGISLGASESPKIIRRLVAALTFHQFFEGMGLGRKFQEYVCYNNGVVLHVNHTPVEIGIGIRIASIYDENSPTELIAERIFDNTASAGILIYMALVDLLAADFRNPRMQKSGRHGLGFNLSPAWSWLRVCFG 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1950 339 TIGRFAM zip: ZIP zinc/iron transport family 26 320 IPR004698 GO:0005385|GO:0016021|GO:0071577
Ssu9g1950 339 Pfam ZIP Zinc transporter 41 318 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Ssu9g1950 339 PANTHER ZINC TRANSPORTER 1 21 328 - -
Ssu9g1950 339 PANTHER ZINC/IRON TRANSPORTER 21 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1950 Ssu-Chr9 57306795 57309620 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1950 20 318 Inorganic Solute Cotransporters AT3G12750 50.000 2.23e-95 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1950 K14709 - gmx:547695 405.601