Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1911 ATGTCGATGGCGATGGCTGAAGCTTCAAGAATCATGTTGCACTCCACTCTGGTTCCTTGTTTTAGCCCCAGAACCCATGTGGGTCACCGTCACCTAAGTGTGTCAGGCAAGCACCAAATTCATTGCTCAGTGTCTGCAAGTGGTGTCACTCAAGCCTCAGTGCCTTGGGGCTGCGACATTGACTCGTTAGAGAACGCGTCAGCTTTGCAGAGGTGGCTCTCAGAGTCAGGGCTTCCGCCGCAGAAGATGGGCATAGAGAGAGTGGATGTGGGAGAGAGAGGACTTGTTGCTTTCAAGAACATTAGGAAAGGGGAAAAGCTCCTCTTTGTGCCTCCCTCCCTTGTCATAACTCCAAATTCTGAGTGGAGCTGCCCAGAAGCTGGTGAAGTATTGAAAAGGAATTCAGTGCCAGATTGGCCTTTGCTTGCAACTTACCTCATAAGTGAAGCTAGCCTCATGGAATCTTCAAGATGGAGCCATTATATATCAGCCCTACCTCGTCAACCTTACTCGCTTCTTTACTGGTCACAAGCAGAACTAGATCGCTACTTGGAAGCTTCGCAAATTAGGGAGAGAGCAATTGAAAGGATTAATAATGTTATTGGAACATACAATGATTTGAGGCTCAGAATATTTTCCAAATACCCTGATTTATTCCCTGATGAGGTGTTCGACATAGAGTCCTTCAAATGGTCATTTGGTATATTGTTCTCCCGCTTGGTTCGGTTGCCCTCAATGGATGGAAAGGTTGCCTTGGTTCCTTGGGCTGATATGCTGAATCATAGTTGTGATGTGGAGACATTTTTGGATTATGATAAGACATCAAAGGGAATTGTCTTCACGACAGATCGGCCCTATCAACCAGGTGAGCAGGTGTTTATTTCGTAtggaaaaaaatcaaatggggAGCTTTTGTTATCTTATGGATTTGTTCCAAAGGAAGGCGCTAATCCTAGTGATTCAGTTGAGTTGTCACTGTCACTGAAGAAATCTGATGCGTCCTATAAGGAGAAGTTAGAACTGTTGAAGAAGTATGGATTATCAGCGTGA 1050 0.4438 MSMAMAEASRIMLHSTLVPCFSPRTHVGHRHLSVSGKHQIHCSVSASGVTQASVPWGCDIDSLENASALQRWLSESGLPPQKMGIERVDVGERGLVAFKNIRKGEKLLFVPPSLVITPNSEWSCPEAGEVLKRNSVPDWPLLATYLISEASLMESSRWSHYISALPRQPYSLLYWSQAELDRYLEASQIRERAIERINNVIGTYNDLRLRIFSKYPDLFPDEVFDIESFKWSFGILFSRLVRLPSMDGKVALVPWADMLNHSCDVETFLDYDKTSKGIVFTTDRPYQPGEQVFISYGKKSNGELLLSYGFVPKEGANPSDSVELSLSLKKSDASYKEKLELLKKYGLSA 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1911 349 PANTHER - 29 291 - -
Ssu9g1911 349 CDD SET_RBCMT 80 311 IPR044431 GO:0016279|GO:0018022
Ssu9g1911 349 Pfam SET domain 93 297 IPR001214 GO:0005515
Ssu9g1911 349 Gene3D - 316 349 IPR036464 -
Ssu9g1911 349 Gene3D set domain protein methyltransferase, domain 1 35 310 - -
Ssu9g1911 349 SUPERFAMILY SET domain 65 314 IPR046341 -
Ssu9g1911 349 ProSiteProfiles SET domain profile. 81 297 IPR001214 GO:0005515
Ssu9g1911 349 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 29 291 - -
Ssu9g1911 349 SMART set_7 81 303 IPR001214 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1911 68 266 NAC Transcription Factor Family AT3G56570 23.383 8.52e-08 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Ssu9g1911 SET 1.7e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1911 - - gmx:100803319 633.639