Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1904 ATGGCTGCTTATTTTGTGTGTTTCTGGGGTCTATTTCTCTCATGTTcgatttattttgttcaatcaaAGTCAACTCctcaagtaaaattaatttcgcATAGTGTTTTTATCGCTTCTCTTATAACAACGTATTCTCTTAAATATCTATCTAGTTGTTTTCTTCACATACAGGTCTATATAGTATATTTGGGGCTCAACCATATTCGCGATCCTGGTCTCACTTTTCATTACCACCTTCAACTTCTATCTACAGTTTTCACATgTGAAAAAGATGCGGAACATTCGATTCTCTACAGCTACAAGTATAGTCTCTCAGGGTTTTCAGCAATGCTAAATTCAACCCAAGCAGCTACACTAGCCAATATGCGAGAAGTGGTGTCAGTTTTCAGGAGCAAGTCATCGCAGTCACACACAACAAGAAGCTGGGACTTCTTGGGCCTTAACTTGGACAATAGTGAAGTAAAGCCATTGCAGCTAATTTATGGTGAAGACATTATTGTTGGGGTATTAGACACAGGCGTATGGCCAGAATCTGAAAGTTTCCGGGAAGATCCTAGCATGGGTCCTATTCCAGTGACGTGGAAGGGAGAATGTGTTAAGGGGGAGAGATTTGAGCCTGCAGCCGCATGCAACCGGAAGTTAATTGGTGCTCGTTACTACCTGAAAGGTTTTGAACAGGAATATGGAGCGTTGAATACAACAGAGAACTTCGAGTATGAATCACCTCGAGATTTTGTTGGCCACGGAACCCATACAGCTTCAACAGCAGTGGGGTCCATAGTGGAAGATACAAGCTTCTTTGACTTAGGAAAGGGCACTGCCCGGGGTGGTGCTCCAAGGGCTCGTTTGGCGGTTTATAAAGTATGTTGGAACATTGAATATTATGGAAGATGCACGGAAGCAGATATAATGGCAGCTTTTGATGACGCTTTGCATGATGGTGTACACGTTATCTCGGCCTCTTTTGGTCCAATTCCACCACTAGTTCCCTTCTTCAGAGATAGTTCCAGTATTGGTTCGTTCCATGCCATGCAGCTGGGTGTAACAGTGGTATTCTCCGCAGGAAACTATGATGTGTCGCCCGAGCCATCTCTAGTCGGAAATGTTGAACCATGGTCCATCTGCGTCGCTGCTTCATCGGTTGATAGAACGTTCCCCACAAAAATAATCGTTGGTGATAATGTTTACATGGGAGAAAGCTTAATTACCACACAAATAAAGGCAAAATTGGTGGATGCAAGCACATATTTTTACAATGGgATCTGCAAGATGGACAACATTAAGCCATCAAAAAAAGGTGCGGGGAGGATTGTCCTCTGCTTCTCTACAGTAGGACCCAAATTAAGTCTAGAAGCAGCAGCAGCAGTGAAGACAGTGAATGCAACGGGATTGATCTTTGTGGAACCCATGTCAAGGCAATTACCTGACGTTGAAGTCGTTCCCACAGTCTTAGTCAATTTGGAAGAAGGaactaaaattaagtattatcTTGCTGAATCTCCCagGCTCCCGAAAGTGCAGATAGAACCAAGTAAAACAGTCATTGGCAAGGCACCAGCGCCCACAATTGCATATTTTTCGTCTAGAGGACCTAGCTCAATCACACCCGACATTCTCAAGCCAGACATTAGCGCACCAGGAGTAAACATTTTAGCAGCATGGCCTCCCGAAACTCCTCCCTCGCTATCATCCAGTGACGGATGTTCTGTGAACTGGAATTTTCAATCAGGAACATCCATGGCATGCCCTCATGTGGCCGGTGTCGCTGCCCTTGTCAAATCTGCCCATCCAAGCTGGTCTCCTGCTGCCATTAGATCTGCTCTCATGACAACAGGTGAGCATATACTCTGGACACAACCTTGGACAGTATTCTTGCTGGTGGATCAATGA 1890 0.4344 MAAYFVCFWGLFLSCSIYFVQSKSTPQVKLISHSVFIASLITTYSLKYLSSCFLHIQVYIVYLGLNHIRDPGLTFHYHLQLLSTVFTCEKDAEHSILYSYKYSLSGFSAMLNSTQAATLANMREVVSVFRSKSSQSHTTRSWDFLGLNLDNSEVKPLQLIYGEDIIVGVLDTGVWPESESFREDPSMGPIPVTWKGECVKGERFEPAAACNRKLIGARYYLKGFEQEYGALNTTENFEYESPRDFVGHGTHTASTAVGSIVEDTSFFDLGKGTARGGAPRARLAVYKVCWNIEYYGRCTEADIMAAFDDALHDGVHVISASFGPIPPLVPFFRDSSSIGSFHAMQLGVTVVFSAGNYDVSPEPSLVGNVEPWSICVAASSVDRTFPTKIIVGDNVYMGESLITTQIKAKLVDASTYFYNGICKMDNIKPSKKGAGRIVLCFSTVGPKLSLEAAAAVKTVNATGLIFVEPMSRQLPDVEVVPTVLVNLEEGTKIKYYLAESPRLPKVQIEPSKTVIGKAPAPTIAYFSSRGPSSITPDILKPDISAPGVNILAAWPPETPPSLSSSDGCSVNWNFQSGTSMACPHVAGVAALVKSAHPSWSPAAIRSALMTTGEHILWTQPWTVFLLVDQ 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1904 629 CDD Peptidases_S8_3 137 611 IPR034197 -
Ssu9g1904 629 SUPERFAMILY Subtilisin-like 137 621 IPR036852 GO:0004252|GO:0006508
Ssu9g1904 629 Pfam Subtilase family 162 612 IPR000209 GO:0006508|GO:0008236
Ssu9g1904 629 CDD PA_subtilisin_like 389 508 - -
Ssu9g1904 629 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 54 137 IPR037045 -
Ssu9g1904 629 ProSitePatterns Serine proteases, subtilase family, serine active site. 577 587 IPR023828 -
Ssu9g1904 629 Pfam Peptidase inhibitor I9 58 133 IPR010259 -
Ssu9g1904 629 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 55 612 IPR045051 -
Ssu9g1904 629 Gene3D Peptidase S8/S53 domain 164 614 IPR036852 GO:0004252|GO:0006508
Ssu9g1904 629 ProSiteProfiles Serine proteases, subtilase domain profile. 141 629 - -
Ssu9g1904 629 PRINTS Subtilisin serine protease family (S8) signature 162 181 IPR015500 -
Ssu9g1904 629 PRINTS Subtilisin serine protease family (S8) signature 576 592 IPR015500 -
Ssu9g1904 629 PRINTS Subtilisin serine protease family (S8) signature 244 257 IPR015500 -
Ssu9g1904 629 PANTHER SUBTILISIN-LIKE PROTEASE SBT3.18 55 612 - -
Ssu9g1904 629 Gene3D - 382 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1904 Ssu-Chr9 56557733 56560864 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1904 88 611 Subtilisin-like Serine Gene Family AT4G26330 60.943 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1904 - - jre:109002178 806.979